Chemical Structure
Chemical structure research focuses on representing and understanding the arrangement of atoms in molecules and materials to predict their properties and design new compounds. Current efforts leverage graph-theoretic descriptors, graph neural networks (GNNs), and other machine learning models like linear regression and convolutional neural networks (CNNs) to analyze these structures, often incorporating 3D representations for enhanced accuracy. This work is crucial for accelerating drug discovery, materials science, and nanotoxicology by enabling faster, more accurate prediction of physicochemical properties and facilitating the design of molecules with desired characteristics, reducing reliance on expensive and time-consuming experimental methods.
Papers
A Unified Approach to Inferring Chemical Compounds with the Desired Aqueous Solubility
Muniba Batool, Naveed Ahmed Azam, Jianshen Zhu, Kazuya Haraguchi, Liang Zhao, Tatsuya Akutsu
AI and Machine Learning Approaches for Predicting Nanoparticles Toxicity The Critical Role of Physiochemical Properties
Iqra Yousaf
MolGrapher: Graph-based Visual Recognition of Chemical Structures
Lucas Morin, Martin Danelljan, Maria Isabel Agea, Ahmed Nassar, Valery Weber, Ingmar Meijer, Peter Staar, Fisher Yu
Predicting Drug Solubility Using Different Machine Learning Methods -- Linear Regression Model with Extracted Chemical Features vs Graph Convolutional Neural Network
John Ho, Zhao-Heng Yin, Colin Zhang, Nicole Guo, Yang Ha