cs.LGFeb 24, 2026

Probing Graph Neural Network Activation Patterns Through Graph Topology

Authors: Floriano Tori, Lorenzo Bini, Marco Sorbi, Stéphane Marchand-Maillet, Vincent Ginis

Organizations: Business Technology and Operations, Vrije Universiteit Brussels, Brussels, Belgium · Department of Computer Science, University of Geneva, Geneva, Switzerland · Research Institute for Statistics and Information Science, Geneva, Switzerland · School of Engineering and Applied Sciences, Harvard University

Abstract

Curvature notions on graphs provide a theoretical description of graph topology, highlighting bottlenecks and denser connected regions. Artifacts of the message passing paradigm in Graph Neural Networks, such as oversmoothing and oversquashing, have been attributed to these regions. However, it remains unclear how the topology of a graph interacts with the learned preferences of GNNs. Through Massive Activations, which correspond to extreme edge activation values in Graph Transformers, we probe this correspondence. Our findings on synthetic graphs and molecular benchmarks reveal that MAs do not preferentially concentrate on curvature extremes, despite their theoretical link to information flow. On the Long Range Graph Benchmark, we identify a systemic curvature shift: global attention mechanisms exacerbate topological bottlenecks, drastically increasing the prevalence of negative curvature. Our work reframes curvature as a diagnostic probe for understanding when and why graph learning fails.

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