ReCUBE: Evaluating Repository-Level Context Utilization in Code Generation

Recently, a number of repository-level code generation benchmarks-such as CoderEval, DevEval, RepoEval, RepoBench, and LongCodeArena-have emerged to evaluate the capabilities of large language models (LLMs) beyond standalone benchmarks like HumanEval and MBPP. Thus, a natural question is, would LLMs have similar performance in real world coding tasks as their performance in these benchmarks? Unfortunately, one cannot answer this question, since these benchmarks consist of short completions, synthetic examples, or focus on limited scale repositories, failing to represent real-world coding tasks. To address these challenges, we create REPOCOD, a Python code-generation benchmark containing complex tasks with realistic dependencies in real-world large projects and appropriate metrics for evaluating source code. It includes 980 whole-function generation tasks from 11 popular projects, 50.8% of which require repository-level context. REPOCOD includes 314 developer-written test cases per instance for better evaluation. We evaluate ten LLMs on REPOCOD and find that none achieves more than 30% pass@1 on REPOCOD, indicating the necessity of building stronger LLMs that can help developers in real-world software development. In addition, we found that retrieval-augmented generation achieves better results than using target function dependencies as context.

Modern coding agents are usually evaluated by whether they eventually produce a correct patch, but patch generation depends on an earlier context-acquisition stage: finding the repository files needed for the task. We introduce Agent Retrieval Bench, a file-level benchmark for this upstream retrieval problem. Samples are built from real coding-workflow signals and evaluated against frozen base-commit repositories, with relevance defined by what an agent needs next rather than direct query-file semantic similarity. The benchmark covers four positive-retrieval tasks: code2test, comment2context, trace2code, and edit2ripple; a fifth subset evaluates selective retrieval using natural evidence-backed no-gold cases and counterfactual wrong-repository controls. Agent Retrieval Bench contains 427 samples across 25 repositories: 345 positive examples, 50 natural no-gold examples, and 32 counterfactual controls. The corpus includes 308 base-commit snapshots, 392,000 files, and 7.9 million chunks. We evaluate lexical retrieval, RepoMap, open-source embeddings, selective abstention, and logged agent context selection. No single retrieval family dominates: Qwen3-Embedding-4B has the best sample-weighted MRR on positive samples, Qwen3-Embedding-8B the best Recall@20, and RepoMap the best budgeted context yield at 8K tokens, with task-level winners differing substantially. Selective thresholds calibrated with counterfactual controls do not improve selective success on natural no-gold cases, revealing a calibration gap. Logged trajectories also miss every gold file on 27-35 percent of samples. A controlled seed-intervention pilot finds that retrieval-derived initial context yields higher file F1 with less post-seed exploration than random non-gold context, while oracle gold context shows substantial remaining headroom.

Large Language Model (LLM) coding agents typically explore codebases through repeated file-reading and grep-searching, consuming thousands of tokens per query without structural understanding. We present Codebase-Memory, an open-source system that constructs a persistent, Tree-Sitter-based knowledge graph via the Model Context Protocol (MCP), parsing 66 languages through a multi-phase pipeline with parallel worker pools, call-graph traversal, impact analysis, and community discovery. Evaluated across 31 real-world repositories, Codebase-Memory achieves 83% answer quality versus 92% for a file-exploration agent, at ten times fewer tokens and 2.1 times fewer tool calls. For graph-native queries such as hub detection and caller ranking, it matches or exceeds the explorer on 19 of 31 languages.