GeoAlign: Geometric Feature Realignment for MLLM Spatial Reasoning

While Multimodal Large Language Models (MLLMs) have achieved remarkable success in 2D visual understanding, their ability to reason about 3D space remains limited. To address this gap, we introduce geometrically referenced 3D scene representations (GR3D). Given a set of input images, GR3D annotates objects in the images with unique IDs and encodes their 3D geometric attributes as textual references indexed by these IDs. This representation enables MLLMs to interpret 3D cues using their advanced language-based skills in mathematical reasoning, while concurrently analyzing 2D visual features in a tightly coupled way. We present a simple yet effective approach based on GR3D, which requires no additional training and is readily applicable to different MLLMs. Implemented in a zero-shot setting, our approach yields substantial improvements on challenging spatial reasoning benchmarks, boosting GPT-5 performance by 9% on VSI-Bench and 12% on MindCube. Qualitative studies further demonstrate that GR3D empowers MLLMs to perform complex spatial reasoning with highly sparse input views.

While Multimodal Large Language Models (MLLMs) excel in semantic tasks, they frequently lack the "spatial sense" essential for sophisticated geometric reasoning. Current models typically suffer from exorbitant modality-alignment costs and deficiency in fine-grained structural modeling precision.We introduce SSR, a framework designed for Structured Scene Reasoning that seamlessly integrates 2D and 3D representations via a lightweight alignment mechanism. To minimize training overhead, our framework anchors 3D geometric features to the large language model's pre-aligned 2D visual semantics through cross-modal addition and token interleaving, effectively obviating the necessity for large-scale alignment pre-training. To underpin complex spatial reasoning, we propose a novel scene graph generation pipeline that represents global layouts as a chain of independent local triplets defined by relative coordinates. This is complemented by an incremental generation algorithm, enabling the model to construct "language-model-friendly" structural scaffolds for complex environments. Furthermore, we extend these capabilities to global-scale 3D global grounding task, achieving absolute metric precision across heterogeneous data sources. At a 7B parameter scale, SSR achieves state-of-the-art performance on multiple spatial intelligence benchmarks, notably scoring 73.9 on VSI-Bench. Our approach significantly outperforms much larger models, demonstrating that efficient feature alignment and structured scene reasoning are the cornerstones of authentic spatial intelligence.

Multimodal Large Language Models (MLLMs) demonstrate exceptional semantic reasoning but struggle with 3D spatial perception when restricted to pure RGB inputs. Despite leveraging implicit geometric priors from 3D reconstruction models, image-based methods still exhibit a notable performance gap compared to methods using explicit 3D data. We argue that this gap does not arise from insufficient geometric priors, but from a misalignment in the training paradigm: text-dominated fine-tuning fails to activate geometric representations within MLLMs. Existing approaches typically resort to naive feature concatenation and optimize directly for downstream tasks without geometry-specific supervision, leading to suboptimal structural utilization. To address this limitation, we propose GAP-MLLM, a Geometry-Aligned Pre-training paradigm that explicitly activates structural perception before downstream adaptation. Specifically, we introduce a visual-prompted joint task that compels the MLLMs to predict sparse pointmaps alongside semantic labels, thereby enforcing geometric awareness. Furthermore, we design a multi-level progressive fusion module with a token-level gating mechanism, enabling adaptive integration of geometric priors without suppressing semantic reasoning. Extensive experiments demonstrate that GAP-MLLM significantly enhances geometric feature fusion and consistently enhances performance across 3D visual grounding, 3D dense captioning, and 3D video object detection tasks.