Diagnosable ColBERT: Debugging Late-Interaction Retrieval Models Using a Learned Latent Space as Reference

ClinicalEncoder26AM is a multilingual Diagnosable ColBERT for clinical and biomedical texts, which aligns at multiple levels its token-level semantic with ClinicalMap25, a clinical latent space inspired by BioLORD-2023 and enriched with synthetic and annotated supervision. The post-training recipe builds upon BGE-M3, and combines synthetic clinical notes, patient--doctor conversations, and annotated resources such as MedMentions, while considering both named-entity-level and sentence-level representations in a multi-adapter distillation, along with a ColBERT-style retrieval objective. In this system demonstration paper, we evaluate the model in the MultiClinNER shared task by finetuning it as a BIO tagger for patient symptoms, disorders, and procedure spans, using a lightweight two-layer CNN head to improve local boundary detection. The resulting system remains simple, processes most documents in a single 8192-token window, and achieves state-of-the-art multilingual entity recall, while achieving Top 5 overall across all entity types and languages in Character-weighted F1 scores. Training curves further show that ClinicalEncoder26AM is markedly more data-efficient than the base M3 model, supporting the usefulness of its clinical post-training for downstream information extraction. The model can be downloaded on https://huggingface.co/Parallia/ClinicalEncoder26AM-Diagnosable-Colbert-L2-for-multilingual-medical-texts

Multi-vector dense retrieval models, such as ColBERT, achieve strong retrieval effectiveness by modelling fine-grained token-level interactions between queries and documents. Methods such as PLAID use centroid-based quantisation of each token's vector to reduce the index size and speed up retrieval while maintaining strong effectiveness. In this work, we introduce PLAID-PRF, a method that performs Pseudo-Relevance Feedback (PRF) over PLAID to reformulate ColBERT's query vectors based on the top-retrieved results. In contrast with prior methods that perform PRF on multi-vector retrieval models, PLAID-PRF keeps computational costs low by leveraging the internal PLAID centroid vectors, treating them similarly to tokens in traditional PRF methods. The method selects a small and diverse set of high-utility expansion vectors and appends them to the original query, rerunning PLAID to refine both candidate generation and final scoring. Extensive experiments on the standard in-domain MSMARCO and four out-of-domain BEIR benchmarks show that PLAID-PRF consistently improves retrieval effectiveness over various baselines. In particular, PLAID-PRF improves over PLAID by up to 4.3% nDCG@10 and 7.3% MRR@10, while introducing substantially less computation overhead than prior PRF methods. The results demonstrate that our proposed centroid-aware PRF method offers an effective and lightweight mechanism to improve the quality of top-ranked retrieved results. Overall, this work enables effective and efficient feedback-aware late-interaction retrieval without expensive query-time document-token clustering.

Late-interaction models such as ColBERT achieve strong effectiveness by representing each document with many token-level vectors, but this expressivity leads to large indexing cost, storage footprints and expensive MaxSim scoring. We show that late-interaction representations exhibit an intrinsic low-rank structure: document token embeddings concentrate in a low-dimensional subspace that preserves most of the retrieval signal. Leveraging this observation, we introduce EigenLI, a spectral approximation framework that compresses late-interaction representations via document-specific low-dimensional subspaces. Unlike clustering or pooling methods, EigenLI identifies the dominant eigendirections of each document and uses them to construct reduced interaction representations. Empirically, $k$-EigenLI with $k \le 32$ outperforms k-means and Ward clustering based pooling methods on ColBERTv2 and AnswerAI-ColBERT-small; GTE-ModernColBERT exhibits a different tradeoff at $k=32$, where clustering methods perform better. The same spectral construction also yields EigenLI-SV, an ANN-compatible single-vector representation derived from the second-order summary of the reduced structure. Across multiple datasets and all three text models, EigenLI-SV consistently outperforms comparable single-vector surrogates such as MUVERA.