BCI-sift: An automated feature selection toolbox for Brain Computer Interface applications

Electroencephalography (EEG) is the dominant non-invasive modality for brain-computer interfaces (BCIs), yet reliable decoding of motor imagery is hampered by inter- and intra-individual variability. A recurring claim is that one decoding pipeline, most often a spatial or Riemannian method, is broadly preferable. We test the weakest version of that claim under the most favourable conditions. Using the Mother of All BCI Benchmarks (MOABB) framework, we evaluated 1,056 decoding configurations (feature extractor x scaler x classifier), >340,000 subject-level model fits, across three public left-versus-right motor-imagery datasets (PhysionetMI, 109 participants; Cho2017, 52; Zhou2016, 4) and two frequency bands (8-15 Hz, 8-30 Hz). Every model is fit and tested within a single session of a single participant, the easiest regime, giving every pipeline its best chance. We apply the statistics standard for multi-classifier comparison: Friedman omnibus tests, Nemenyi critical-difference analysis and Wilcoxon signed-rank tests with effect sizes. Covariance tangent-space projection (cov-tgsp) and Common Spatial Patterns (CSP) are the strongest families, but their ordering is dataset-dependent and, on the largest and most heterogeneous cohort (PhysionetMI), statistically indistinguishable (Nemenyi p = 0.27; Kendall's W = 0.11). At the individual level the single best pipeline is optimal for only 35% of PhysionetMI participants, and nonlinear descriptors are best for roughly one third; matching pipeline to participant adds about seven accuracy points over the best fixed choice. The ranking is not an artefact of dimensionality, and classifier and scaler choices are secondary to the feature representation. Even in the easiest regime, no single pipeline dominates: a lower bound on the personalization problem and a quantitative case for participant-aware model selection rather than a universal decoder.

Motor imagery (MI) classification using electroencephalography (EEG) signals is essential for advancing brain-computer interfaces (BCIs). Traditional EEG channel selection methods often face limitations, such as dependency on single-objective criteria and susceptibility to local optima. To address these challenges, this work proposes a multi-objective optimisation framework that employs non-dominated sorting genetic algorithm, multiple-objective particle swarm optimisation, and a multi-objective evolutionary algorithm based on decomposition. Our approach effectively balances spatial relevance, using a Gaussian kernel, and functional discriminability, which assesses intratrial task-related desynchronisation, thereby improving performance. We evaluated this framework on four EEG datasets: Physionet, OpenBMI, HighGamma, and BCIIV-2A. The proposed approach successfully identifies compact, relevant channel subsets concentrated around sensorimotor cortex regions linked to MI activity, addressing the prevalent challenges of dimensionality and complexity inherent to traditional techniques. Furthermore, the framework achieved classification performance of 87%, 71%, 75%, and 65% on the Physionet, OpenBMI, HighGamma, and BCIIV-2A datasets, respectively. By outperforming existing single-objective and accuracy-based methods, and those relying on fixed subsets, these findings demonstrate that this new multi-objective optimisation framework can enhance MI-based BCI performance while facilitating compact channel configurations with reduced computational complexity, making them better suited for wearable, portable, and real-time BCI applications.

Finger-level motor decoding is important for naturalistic brain-computer interface (BCI) control, yet individual-finger decoding from scalp electroencephalography (EEG) remains challenging because finger representations are spatially close in the sensorimotor cortex and blurred by volume conduction. Leveraging the high spatial resolution of functional MRI (fMRI), we introduce fMRI Representation-Informed Shared-Space Training (FRIST), a two-stage EEG decoding framework that first learns fMRI-informed spectral projections from simultaneous EEG-fMRI recordings and then uses fMRI-derived class geometry to guide residual refinement of EEG predictions. FRIST transfers information across recordings through shared finger labels without requiring paired trials and uses only EEG at inference. We evaluated 12 able-bodied participants during movement execution (ME) and motor imagery (MI) under two-class and three-class chronological session-held-out decoding simulating the online scenario. Using EEGNet as the EEG feature extractor, FRIST increased group average accuracy from 66.93% to 74.53% for two-class ME, from 44.83% to 56.58% for three-class ME, from 80.78% to 85.63% for two-class MI, and from 60.93% to 69.90% for three-class MI compared with the EEG-only EEGNet baseline. FRIST is also shown to improve EEG-only decoding when the target participant's own fMRI data were unavailable. FRIST also generalized across multiple EEG decoding backbones, reaching 87.40% in two-class MI and 72.54% in three-class MI with EEG Conformer as the EEG feature extractor. These findings indicate that fMRI provide useful spatial constraints for EEG representation learning. FRIST improves noninvasive EEG-based finger-level BCI decoding, offering a multimodal strategy for integrating the spatial specificity of fMRI with real-time applicability of EEG.