Supervised Latent Restructuring for Small-Data Quantum Learning in Plant Phenomics

Large language and sentence-embedding models provide rich semantic representations, but their high dimensionality poses a challenge for near-term quantum machine learning (QML), where quantum circuits can process only a limited number of input features. We investigate a hybrid quantum-classical pipeline that transforms high-dimensional sentence embeddings into compact representations for variational quantum classification. The workflow combines a pretrained sentence-embedding model, dimensionality reduction, angle encoding, a variational quantum circuit (VQC), and a classical decision layer. We systematically compare principal component analysis (PCA), neighborhood components analysis (NCA), and linear discriminant analysis (LDA), covering both unsupervised and supervised dimensionality reduction. Using the TREC question-classification dataset, we study the relationship between representation dimensionality, information retention, qubit count, and classification performance. Preliminary PCA experiments reveal a strong information bottleneck: reducing 768-dimensional embeddings to 3, 4, 5, and 8 dimensions retains about 8.2%, 10.2%, 11.9%, and 16.4% of the variance, with corresponding classification accuracies of 50.3%, 51.2%, 57.9%, and 63.4%. In contrast, supervised reduction is substantially more efficient. LDA reaches 85.3% accuracy and NCA reaches 83.1% using only 5 dimensions, under a leakage-free cross-validation protocol, compared with 85.1% for a full 384-dimensional classical baseline. These results indicate that supervised dimensionality reduction can preserve task-relevant information far more effectively than variance-based compression, making compact representations a promising route toward practical hybrid quantum-classical NLP models.

Quantum kernel methods have been proposed as a promising approach for leveraging near-term quantum computers for supervised learning, yet rigorous benchmarks against strong classical baselines remain scarce. We present a comprehensive empirical study of quantum kernel support vector machines (QSVMs) across nine binary classification datasets, four quantum feature maps, three classical kernels, and multiple noise models, totalling 970 experiments with strict nested cross-validation. Our analysis spans four phases: (i) statistical significance testing, revealing that none of 29 pairwise quantum-classical comparisons reach significance at $α= 0.05$; (ii) learning curve analysis over six training fractions, showing steeper quantum slopes on six of eight datasets that nonetheless fail to close the gap to the best classical baseline; (iii) hardware validation on IBM ibm_fez (Heron r2), demonstrating kernel fidelity $r \geq 0.976$ across six experiments; and (iv) seed sensitivity analysis confirming reproducibility (mean CV 1.4%). A Kruskal-Wallis factorial analysis reveals that dataset choice dominates performance variance ($\varepsilon^2 = 0.73$), while kernel type accounts for only 9%. Spectral analysis offers a mechanistic explanation: current quantum feature maps produce eigenspectra that are either too flat or too concentrated, missing the intermediate profile of the best classical kernel, the radial basis function (RBF). Quantum kernel training (QKT) via kernel-target alignment yields the single competitive result -- balanced accuracy 0.968 on breast cancer -- but with ~2,000x computational overhead. Our findings provide actionable guidelines for quantum kernel research. The complete benchmark suite is publicly available to facilitate reproduction and extension.

Autoencoders transformed classical machine learning by solving the curse of dimensionality, enabling principled weight initialization and learning compact, structured representations. In this work, we extend this paradigm to quantum machine learning by introducing a variational autoencoder framework that learns task-specific quantum embeddings of classical data. We demonstrate that high-dimensional datasets, including ImageNet, can be compressed into a 13-qubit quantum representation while remaining reconstructable through a learned decoder. On MNIST (3 vs 5), our approach achieves 98.5% validation accuracy using a circuit-centric quantum classifier, within 1.2 percentage points of a classical neural network baseline (99.7%) and more than 30 percentage points above a naive amplitude-embedding approach. Unlike amplitude embeddings, which require full quantum state tomography for recovery, or angle embeddings, which generally rely on circuit inversion under restrictive assumptions, the proposed framework reconstructs the original data from only a polynomial number of measurements. The framework was further validated on IBM quantum hardware, confirming that the learned embeddings remain stable and reconstructable under real device noise.