Vortex: Efficient and Programmable Sparse Attention Serving for AI Agents

The quadratic complexity of attention imposes severe memory and computational bottlenecks on Large Language Model (LLM) inference. This challenge is particularly acute for emerging agentic applications that require processing multi-million token sequences. We propose STS, a sparse attention mechanism that requires no model retraining. STS leverages the key insight that tokens identified as important by a smaller draft model are highly predictive of important tokens for a larger target model. By integrating into speculative decoding frameworks, STS repurposes the draft model's attention scores to dynamically construct a token-and-head-wise sparsity mask. This mask effectively prunes the expensive attention computation in the target LLM. Our evaluation shows that STS achieves a 2.67x speedup operating at approximately 90% sparsity on representative benchmark NarrativeQA, maintaining negligible accuracy degradation compared to dense attention. STS establishes a new state-of-the-art on the sparsity-accuracy trade-off, outperforming prior techniques by enabling higher sparsity levels for a given accuracy budget.

Long-context LLM serving is bottlenecked by the cost of attending over ever-growing KV caches. Dynamic sparse attention promises relief by accessing only a small, query-dependent subset of the KV state per decoding step and extending the KV storage to CPU memory. In practice, however, these algorithmic savings rarely translate into end-to-end system-level gains because sparse methods typically operate at different granularities and thus rely on ad hoc, per-algorithm implementations. At the same time, hierarchical KV storage introduces a new systems bottleneck: retrieving fine-grained, irregular KV subsets across the GPU-CPU boundary can easily erase the benefits of sparsity. We present SPIN, a sparse-attention-aware inference framework that co-designs the execution pipeline with hierarchical KV storage through three techniques: (1) a unified partition abstraction that maps different sparsity granularities onto a shared page-based KV substrate; (2) a locality-aware KV cache manager that dynamically sizes per-request HBM budgets and uses a GPU-friendly bucketed LRU policy to cut PCIe round-trips; and (3) a two-level hierarchical metadata layout sized to the active working set rather than the worst-case address space. Built on vLLM with three representative sparse attention algorithms, SPIN delivers 1.66-5.66x higher end-to-end throughput and 7-9x lower TTFT than vLLM, and reduces TPOT by up to 58% over the original sparse-attention implementations.

Recent advances in sparse attention mechanisms have demonstrated strong potential for reducing the computational cost of long-context training and inference in large language models (LLMs). Native Sparse Attention (NSA), one state-of-the-art approach, introduces natively trainable, hardware-aligned sparse attention that delivers substantial system-level performance boosts while maintaining accuracy comparable to full attention. However, the kernel implementation of NSA forces a loop order that is only efficient with a relatively large number of query heads in each Grouped Query Attention (GQA) group, whereas existing LLMs widely adopt a much smaller number of query heads in each GQA group -- such an inconsistency significantly limits the applicability of this sparse algorithmic advance. In this work, we propose Flash Sparse Attention (FSA), an alternative kernel implementation that enables efficient NSA computation across a wide range of popular LLMs with a varied, smaller number of heads in each GQA group on modern GPUs. Compared to vanilla NSA kernel implementation, our empirical evaluation demonstrates that FSA achieves (i) up to 3.5x and on average 1.6x kernel-level latency reduction, (ii) up to 1.25x and 1.09x on average end-to-end training speedup on state-of-the-art LLMs, and (iii) up to 1.36x and 1.11x on average for prefill-phase speedup in LLM generative inference. The source code is open-sourced and publicly available at https://github.com/Relaxed-System-Lab/Flash-Sparse-Attention.