ATLAS: Agentic Taxonomy of Large-Scale Software Ecosystems

GitHub hosts hundreds of millions of public repositories, but the platform exposes no native mapping from repositories to standardized industry sectors. This gap limits empirical work on the geography of innovation, the industrial composition of open-source production, and the diffusion of new technologies across economic sectors. We present NAICS-GH, a publicly released corpus of 6,588 GitHub repositories drawn from source pools covering the United States, the European Union, and Australia, each labeled with a 2-digit sector from the North American Industry Classification System (NAICS 2022). Labels are produced by a retrieve-and-verify pipeline that combines BAAI/bge-large-en embeddings, FAISS retrieval, and GPT-4.1 rubric scoring. The pipeline narrows about 1.37 million source repositories to 31,178 candidate repository-sector pairs and retains 6,588 high-confidence labels with score at least 8. Re-running the retrieval pipeline end to end reproduces the candidate set to within 0.03 percent. On a 2,421-repository human-validated random sample, the released labels attain 96.98 percent precision, with Wilson 95 percent confidence interval [96.23, 97.59]. We benchmark six pretrained encoders on the released corpus; RoBERTa-large reaches 86.45 percent F1 and 86.35 percent accuracy on a held-out 20 percent test set. The dataset, Croissant metadata, pipeline code, prompts, and fine-tuned checkpoint are released under CC-BY-4.0 and MIT licenses.

Software repositories accumulate large amounts of unstructured knowledge in commit messages, pull-request discussions, and issue threads, but developers and AI coding assistants rarely reuse this history effectively. Recent work on typed-memory architectures for LLM agents (MemGPT, generative agents, and the PlugMem module of Yang et al.) argues that agent memory should be distilled, typed knowledge rather than raw interaction text. We adapt that stance to a software repository's own git history under a constrained regime: deterministic, dependency-free, local-only, no embeddings. We present CommitDistill, an open-source Python prototype that mines a local git history into typed knowledge units (Facts, Skills, Patterns) using deterministic regex and surfaces them through a TF-IDF retriever with a calibrated silence threshold (theta = 2.5) that abstains on out-of-distribution queries. The artefact is a trust-instrumented memory substrate: deterministic, no external service, inspectable plain-JSON store, tunable abstention. A case study on five public repositories spanning Python, JavaScript, C, and Java (25,000 commits, 1,167 extracted units) reports useful-precision 0.525 at Cohen's kappa = 0.633 on 40 dual-annotated Python units. The decisive finding is budget-constrained retrieval: at a 256-character per-query budget, CommitDistill reaches 0.750 hit-rate on a 12-query benchmark against BM25's 0.333 and git log --grep's 0.083. On a four-arm paired LLM-as-judge evaluation (n=200 time-travel bug-fixes, two judges) covering control, CommitDistill, a body-budget-matched CD-Hybrid, and BM25, no condition produces a statistically detectable lift over control on the headline mean and CD-Hybrid is indistinguishable from BM25 head-to-head. Extraction over 10,000 commits completes in under 4 seconds on a laptop. Source, annotations, baselines, and a reproducibility script accompany this paper.

Large language models have shown strong performance on software engineering (SE) tasks, yet understanding large industrial repositories remains challenging. Existing methods often retrieve only local fragments and fail to recover the broader task-relevant context needed for complex repository-level tasks. We present DeepDiscovery, a task-level repository-understanding method for large industrial codebases. DeepDiscovery uses a two-stage \textit{Location--Inference} framework to localize high-confidence task anchors and recover broader task-relevant context over multi-relational repository structure under budget constraints. Across controlled method-level evaluation, organization-internal industrial repository-understanding scenarios, and end-to-end evaluation on SWE-bench Verified, DeepDiscovery consistently improves task-relevant file recovery and downstream SE performance. On 27 medium-scale tasks, DeepDiscovery achieves the best file recovery quality among five representative baselines without offline preprocessing. On organization-internal industrial tasks from a production-scale integrated codebase ecosystem, including 27 medium-scale tasks and 40 large-scale tasks, DeepDiscovery improves Full Recall Rate across multiple AI coding systems, with absolute gains ranging from 1.6 to 9.2 percentage points on large subprojects and from 2.5 to 7.4 percentage points on medium-scale subprojects. In a controlled end-to-end evaluation on SWE-bench Verified, a system equipped with DeepDiscovery achieves a 78.6% Solve Rate, outperforming the corresponding baseline by 8.2 percentage points. These results suggest that stronger task-level repository understanding can improve coding-agent performance on complex SE tasks.