Topology-Informed Neural Networks for Flood Detection in Optical and Synthetic Aperture Radar Imagery
Authors: Sophia Li, Max Zhao, Raghu G. Raj, Tianyu Chen
Organizations: aU.S. Naval Research Laboratory, Washington, DC, USA · bStanford University, Stanford, CA, USA
Abstract
Floods frequently impact regions around the world. Rapid and accurate flood detection is crucial for emergency response and timely mitigation of human and economic loss. The expanding availability of satellite data and advances in artificial intelligence have enhanced monitoring of environmental hazards, but many flood events remain challenging to detect because cloud cover obscures optical satellite imagery. Rambour et al. introduced the SEN12-FLOOD dataset and extracted per-image features using a ResNet-50 convolutional neural network backbone, then fed these features into a gated recurrent unit network to show that temporal information can substantially improve accuracy compared to single-image baselines. More recently, Chamatidis et al. showed that a vision transformer can achieve strong performance with popular convolutional architectures. However, these models typically function as opaque black boxes, making it difficult to interpret their decision boundaries, learned features, and internal reasoning, especially in safety-critical domains like remote sensing. In contrast, topological data analysis (TDA) provides a mathematically grounded framework for capturing global structural features of data. TDA has emerged as a powerful tool for analyzing complex imagery, especially imagery with geometrically interpretable structures, of which floods are a prime candidate. In this work, we systematically evaluate topological descriptors for flood detection using the open-source SEN12-FLOOD dataset. By extracting topological features from each image and incorporating them into neural networks, we demonstrate that topological descriptors carry meaningful flood signals independently and complement existing networks to yield more robust and interpretable flood detection systems.
Rapid and accurate flood prediction is essential for disaster response and mitigation planning. Synthetic Aperture Radar (SAR) sensors in satellites are well-suited for this purpose because they operate independently of weather and daylight conditions. Although SAR-based data enable all-weather flood monitoring, distinguishing flooded land from permanent water remains a significant challenge, particularly when flooding is defined strictly as inundated land. This study provides a comprehensive comparison of convolutional neural network (CNN) and vision transformer architectures for multi-class flood segmentation using Sentinel-1 SAR imagery, specifically trained to separate flooded land from permanent water bodies and land. Three state-of-the-art (SOTA)CNN-based models, U-Net, U-Net++, and DeepLabV3 with ResNet-34 backbone, and three SegFormer variants (b0,b1,b2) were evaluated in two benchmark datasets, the ETCI NASA dataset and SenFloods11, using scene-based data splits to ensure a realistic assessment of spatial generalization. The results demonstrate that SegFormer-b2 significantly outperforms the U-Net baseline on the ETCI dataset (higher flood IoU across all 7 test scenes in the Wilcoxon signed-rank test), while after fine-tuning on Sen1Floods11, the advantage narrows to within the range of scene variability and is concentrated in spatially fragmented flood events. The study includes both qualitative and quantitative explainability techniques to visually comprehend model decisions and systematically assess prediction reliability. Qualitative analysis reveals that SegFormer-b2 produces more spatially coherent Grad-CAM activations focused on flood-relevant features, while U-Net generates more informative uncertainty estimates along flood boundaries.
Flooding is the most pervasive natural disaster worldwide. Timely and accurate flood inundation mapping are essential for informing disaster risk management. Optical satellite missions provide high-resolution, multispectral observations critical for flood detection and inundation mapping. However, their operational utility is severely constrained by cloud cover during extreme precipitation events. Conventional cloud-removal techniques based on temporal compositing or interpolation often fail to capture inundation dynamics. In this study, we introduce a cloud-removal framework for flood imagery based on Denoising Diffusion Probabilistic Models, leveraging the Masked Diffusion Transformer architecture. The proposed approach exploits self-attention mechanisms to capture wider spatial context and employs masked token modeling to explicitly learn the reconstruction of cloud-obscured regions. Trained on multispectral Sentinel-2B flood scenes with realistic cloud patterns, the model generates cloud-free image realizations that preserve both visual fidelity and hydrological consistency. Reconstruction performance is evaluated using standard image quality metrics alongside flood-specific hydrological measures, demonstrating improved continuity of water bodies and preservation of spectral signatures critical for water detection indices. The results indicate that diffusion-based generative modeling offers a robust and physically consistent alternative for cloud removal in optical flood monitoring, enabling more reliable, continuous observations to support disaster risk management and flood-related decision making.
Geospatial foundation models aim to learn representations that transfer across regions and sensors, yet evaluating them on specific tasks requires large, high-quality, multi-modal benchmarks that measure how well such models extract value from data. Concerning flood mapping, existing datasets rarely combine bi-temporal SAR and co-registered optical imagery at scale, leaving the value of foundation models for this downstream task largely untested. We introduce GEOID-Flood, a large-scale multi-modal flood segmentation benchmark, derived from Copernicus Emergency Management Service activations, spanning 219 events across 65 countries over ten years. The dataset provides more than 14,000 tiles with co-registered pre- and post-event Sentinel-1, in GRD and RTC format, pre-event Sentinel-2 composite, and DEM, including manually validated labels that separate background from permanent water and flooded water. Using this benchmark, we evaluate foundation models against conventional encoders across single-image, multi-temporal, and multi-modal protocols. We report three main findings: foundation models offer a consistent but modest advantage; optical-SAR fusion with finetuning best resolves transient flooding; and models trained on GEOID-Flood transfer to unseen events better than those trained on existing datasets. Dataset and code available at https://github.com/links-ads/geoid-flood.
Gaetano Chiriaco, Luca Barco, Andrea Bragagnolo +2