CHARM: A Multimodal Graph Foundation Model with Hierarchical Context Modeling for Zero-Shot Transfer

Graph Foundation Models (GFMs) have recently emerged as a promising paradigm for enabling knowledge transfer across diverse domains. Unlike traditional graph learning methods that are typically designed for in-domain settings, GFMs aim to learn transferable knowledge that can generalize to unseen graph domains. However, unlike language or visual data, graphs lack intrinsic and unified representation units, such as tokens in language and patches in vision, making it challenging to identify transferable knowledge units for building graph foundation models. Existing graph foundation models mainly focus on mitigating domain discrepancies through feature alignment and structure alignment, while overlooking the exploration of transferable knowledge units underlying graph data. Moreover, these methods generally rely on fixed propagation mechanisms during message passing, overlooking the heterogeneity in propagation patterns, as different edges may exhibit distinct propagation patterns for different feature dimensions. To address these limitations, we propose a Propagation-aware Graph Foundation Model (ProGFM), which regards the propagation relationships between edges and feature dimensions as transferable knowledge units. Through a propagation relationship prototype bank, ProGFM learns cross-domain transferable propagation knowledge, enabling adaptive information aggregation in unseen graph domains. Extensive experiments across various cross-domain transfer scenarios demonstrate that ProGFM possesses strong cross-domain knowledge transfer capability and exhibits superior generalization performance compared with existing methods.

Multimodal-attributed graphs (MAGs), whose nodes carry modalities such as images and text alongside topological structure, now pervade applications including social platforms, e-commerce, and biomedical networks, offering richer semantic signals than single-modality graphs. In practice, such graphs are fragmented across privacy-restricted silos owned by different platforms and institutions, so learning a broadly transferable model over them demands collaborative training that never exposes raw data. This places the task at the intersection of multimodal graph learning and federated learning, yet existing methods cover only one side of it. To address the challenges from these two perspectives, we propose FedGAMMA, casting federated multimodal graph foundation learning as a two-stage semantic-structural alignment problem of federated pre-training and prompt-based fine-tuning. During pre-training, a shared-private semantic enhancer disentangles cross-modal commonality from modality-specific information, aligning it through optimal transport, a topology-aware graph fusion module decouples semantic and structural views via semantic residual graphs and dual positional encodings, and a dual-channel affinity-aware aggregation mechanism estimates client similarity from feature and graph centroids without exposing raw data. During fine-tuning, FedGAMMA adapts the pretrained encoder through lightweight graph-aware prompts, a shared prompt pool with controlled exploration, and channel-wise prompt synchronization. Experiments on twelve multimodal graph datasets show FedGAMMA consistently surpassing a broad range of baselines across downstream tasks, with gains of up to 12.96%. FedGAMMA further outperforms competitive baselines accross multi-domain datasets on multiple tasks with up to 5.71% under few-shot learning scenario.

Graph Foundation Models (GFMs) have emerged as a promising paradigm for learning transferable representations across diverse graph domains. Recent advancements in GFMs have been largely dominated by two paradigms: Graph Neural Network and Large Language Model (LLM) based methods. However, these methods often face a fundamental dilemma between training with limited data and a heavy reliance on textual attributes. Tabular foundation models (TFMs) offer a potential alternative, as node features and representations can be naturally organized in a tabular form. However, how to enable TFMs to effectively capture structural information of graphs remains largely unexplored. The key challenge is to learn a graph-to-table alignment mechanism that enables graph structural understanding for TFMs. To address this, we propose GTAlign, a surprisingly simple yet effective Graph-to-Table Alignment framework for text-free Graph Foundation Model. Specifically, we first pretrain a graph encoder that maps diverse graphs into a unified latent space to capture domain-agnostic graph representations. To further bridge the gap between graph topology and the tabular representation space, we propose community-guided continual pre-training, where pseudo-labels derived from graph community are used to construct few-shot prediction episodes. Lastly, we adapt the graph encoder for an unseen target domain and perform in-context inference. Extensive experiments on five benchmark datasets demonstrate that GTAlign significantly outperforms state-of-the-art baselines on both node and graph classification, offering a simple, effective, and text-free GFM model. Code will be released upon acceptance.