Automated Transcript Analysis for Detecting Flaws in Agentic Benchmarks
Authors: Jeff Mohl, Nelson Gardner-Challis, Magda Dubois, Harry Coppock, Benjamin Allan-Rahill, Kaelan Yim, Damian Sójka, James Mann, +1 more
Organizations: Independent · UK AI Security Institute · MARS · MARS; Poznan University of Technology; Akces NCBR · Poznan University of Technology · Akces NCBR · Generality Labs
Abstract
Capabilities of frontier models are often assessed using agentic benchmarks. To trust these results, benchmarks must accurately measure what they claim to and be free from invalidating flaws. Previous manual audits of benchmarks such as SWE-Bench-Verified have uncovered several validity issues in transcripts. However, manual review is difficult to scale, and it is unclear whether automated methods can reliably surface flaws that compromise benchmark validity. In this paper, we developed AI scanners to detect four types of validity issues: ground truth access, tool failure, guessing vulnerability, and answer format ambiguity. We produced grading rubrics for each to instruct human labeling, and evaluated the scanners against human labels on a held-out test set of Inspect Evals benchmarks. Our scanners identified several verified quality issues in five widely used benchmarks, including cases unlikely to be caught by random manual inspection. Not all cases were identified, and scanner performance varied substantially across benchmarks, criteria and models. We highlight several open challenges to be addressed to improve scanners for stronger quality assurance claims, including broader standardization gaps in the evaluation field that degrade scanner performance. Together, these results serve as a proof of concept for using automated transcript analysis to audit benchmark quality more broadly.
As benchmarks grow in complexity, many apparent agent failures are not failures of the agent at all - they are failures of the benchmark itself: broken specifications, implicit assumptions, and rigid evaluation scripts that penalize valid alternative approaches. We propose employing frontier LLMs as systematic auditors of evaluation infrastructure, and realize this vision through BenchGuard, the first automated auditing framework for task-oriented, execution-based agent benchmarks. BenchGuard cross-verifies all benchmark artifacts via structured LLM protocols, optionally incorporating agent solutions or execution traces as additional diagnostic evidence. Deployed on two prominent scientific benchmarks, BenchGuard identified 12 author-confirmed issues in ScienceAgentBench - including fatal errors rendering tasks unsolvable - and exactly matched 83.3% of expert-identified issues on the BIXBench Verified-50 subset, catching defects that prior human review missed entirely. A full audit of 50 complex bioinformatics tasks costs under USD 15, making automated benchmark auditing a practical and valuable complement to human review. These findings point toward AI-assisted benchmark development, where frontier models serve not only as subjects of evaluation but as active participants in validating the evaluation infrastructure itself.
Modern AI benchmarks operate at a complexity that outpaces traditional verification methods. Tasks authored by domain experts often contain implicit assumptions, incomplete environment specifications, and brittle evaluation logic that human annotation cannot reliably catch. We introduce Auto Benchmark Audit (ABA), an agentic framework that systematically audits individual benchmark tasks, uncovering issues such as hidden environment dependencies, specification gaps, and limited grading logic. We run ABA on a collection of frontier LLM benchmarks and previous NeurIPS publications, totaling 168 benchmarks across nine domains. Across this corpus, ABA identifies critical issues including ambiguous task design, execution environment conflicts, and incorrect ground truths in over 25.7% of the evaluated tasks. The precision of these automated audits is validated by expert review and independent third-party reports such as upstream PRs. Crucially, we demonstrate that these problematic tasks severely distorts capability assessments for agents and LLMs: filtering out these tasks with issues shifts model rankings and increases average performance on SWE-bench Verified and Terminal-Bench 2 by 9.9% and 9.6%, respectively. We release the agentic tool and all task annotations to support the future development of frontier benchmarks.
Agent benchmarks increasingly evaluate repository editing, web research, terminal use, and long-horizon interaction. Their scores support capability claims only when the evaluation protocol keeps the intended capability necessary for success. Recent reward-hacking benchmarks and system reports show that agents can instead recover public solutions, read evaluation artifacts, infer generator structure, manipulate feedback, or benefit from invalid scoring paths; existing responses do not provide a common procedure for attributing these shortcuts and quantifying their effect across benchmarks. We formulate protocol validity and introduce HackDetect, a post-hoc audit that identifies an exposure, determines how the agent used it, and assesses whether the resulting score is misleading. We quantify score inflation with the Mislead gap, defined as the exploit score minus the intended score. We audit 2,385 traces across 15 agent benchmarks and find evidence of exposures and reward hacking in 67.0% of Frontier Science traces and 66.7% of AutoLab tasks. Across paired comparisons, we measure score inflation of 0.45-1.00, showing that benchmark reports should provide evidence that scores reflect the intended capability.