Pretraining on Call Graphs: When Binary Analysis Tasks Profit From Context

Binary code representation learning is a fundamental problem in software security and reverse engineering. Existing methods mainly learn function-level embeddings that capture coarse-grained semantic relationships between binary functions, but they largely ignore fine-grained instruction-level correspondences. This limitation misses valuable supervision signals available from compiler debug information, which can support the learning of more accurate and interpretable binary code representations. We propose to leverage instruction alignment knowledge to further improve binary code representation learning. Our preliminary study reveals that models finetuned for function-level binary code similarity exhibit substantially better instruction alignment than their pre-trained model, suggesting a strong correlation between instruction alignment and function-level embedding quality. Motivated by this observation, we design a training approach that explicitly incorporates instruction alignment as an auxiliary training objective. Our experiments show that instruction alignment training improves retrieval accuracy and provides more discriminative signal for the model's similarity judgments.

Function association is a useful process for binary reverse engineers. Search tools exist to perform association at scale, but they do not utilize the full range of capabilities that AI-enabled search provides. Prior work has explored the development of embedding models for association between certain reverse engineering code representations, but that work does not cover bidirectional association between source code and decompiled, stripped code with standard preprocessing requirements. To bridge this gap, we formalize this function association problem and evaluate the extent to which embedding models can bidirectionally associate between these two representations. To improve model performance at this task, we fine-tune a Qwen3-Embedding model with contrastive learning. We find that our new model outperforms other models on all function association baselines by a substantial margin and generalizes to a constant-algorithm association task it is not explicitly trained on.

Large Language Models (LLMs) have achieved remarkable progress in recent years, driving their adoption across a wide range of domains, including computer security. In reverse engineering, LLMs are increasingly applied to critical tasks such as function and variable name recovery and type inference. However, despite the rapid growth of research in this area, progress has been hindered by the absence of a standardized dataset. Existing studies rely on disparate datasets, preprocessing pipelines, and evaluation metrics, making fair comparisons between approaches difficult and obscuring a clear understanding of LLM capabilities in binary analysis. To address these challenges, we present REBench, a comprehensive benchmark dataset for evaluating LLMs on binary reverse engineering tasks. REBench consolidates a superset of existing datasets, comprising hundreds of millions of lines of source code and a diverse collection of binaries spanning multiple architectures and optimization levels. REBench adopts a knowledge-base-driven methodology that stores byte-level stack information to generate ground truth, ensuring that task difficulty is preserved while maintaining universal applicability. This design enables fair evaluation across tasks while avoiding simplifications that could bias results. As a use case, we apply REBench to measure the reverse engineering performance of LLMs and the result demonstrates difficulties in complex tasks.