EGT-KG: Evidence-Grounded Typed KG Retrieval for Practical Scientific QA with Small Language Models

Scientific literature is increasingly used as a knowledge source for language models, retrieval-augmented generation systems, and research assistants, but answering research questions from papers requires more than fluent generation. A reliable system must identify the relevant papers, locate the concrete evidence that supports the answer, and produce a response that is faithful to that evidence. We present LitTraceQA, a benchmark for literature-grounded question answering over scientific papers. Given a research question and a metadata pool of papers, a system must return three connected outputs: canonical paper identifiers, supporting evidence locations, and answers in one or more requested formats, including free-form text, multiple-choice answers, and structured tables. LitTraceQA targets evidence types common in scientific reading: tables, figures, text spans, equations or algorithms, and citation contexts. The public development split contains 55 examples, including 26 hidden-source single-paper questions and 29 multi-paper questions, and provides gold papers, evidence annotations, and answers for local validation. We also analyze a larger final annotation collection with 4,978 unique-question records over 4,859 unique gold papers. By evaluating paper retrieval, evidence grounding, and answer accuracy separately, LitTraceQA provides a testbed for scientific QA systems that produce verifiable answers rather than unsupported summaries.

A recent Nature Medicine study reports that general-purpose frontier LLMs outperform specialized retrieval-augmented clinical tools on medical benchmarks, and that retrieval can hurt strong models. We ask the natural follow-up: does structured knowledge-graph (KG) grounding change this, and when does grounding help at all? We contribute two results. First, a reproduction: the study's headline HealthBench score (~88) is the Consensus variant, not full HealthBench, where frontier models and ideal completions both score ~46-47 under a physician-calibrated grader (agreement 82.5%); we reproduce GPT-5.2 Consensus =90.9 and flag a score-deflating grader bug. Second, a knowledge-boundary result. Using a graph+vector engine (samyama-graph) over the public biomedical KG PrimeKG, neither naive triple retrieval nor an agentic natural-language-to-Cypher loop (82% successful queries) improves MedQA across a weak-to-strong model ladder (all |Delta| <= 3.4). On a synthetic counterfactual KG, and on a hybrid benchmark mixing known and novel facts, the identical pipeline lifts out-of-training accuracy from chance to ~100% (+68 to +79) while adding nothing on known facts (a no-LLM arm answers both). Across three regimes (no-knowledge, graph-aided, hybrid), grounding helps only insofar as the decisive fact lies outside the model's training -- public-KG facts are redundant, private and novel data are where it pays -- matching the study's institutional-data caveat.

Retrieval-augmented generation (RAG) has become the standard way to ground large language models in external knowledge, but many systems still organize evidence as flat chunks and retrieve it through largely unstructured search. This weak structure becomes a bottleneck for complex retrieval: the system must decide where to search, how to move from coarse topics to entity-relation evidence, which evidence has been verified, and which intermediate artifacts can be reused. We define these intermediate variables as a retrieval state and study RAG as structured state management. EfficientGraph-RAG makes this state explicit through three coupled mechanisms: TAM defines a typed hierarchical state space over evidence, MARS updates and verifies the state through role-specialized agents, and SMP stores reusable state under hierarchy-aware access control. Using one shared framework configuration, EfficientGraph-RAG ranks first on the reported answer-quality metrics averaged over the three evaluated LongBench retrieval-style subsets, matches the strongest agentic baseline on HotpotQA EM while reducing large-model token usage by $3.51\times$, and provides a low-token DocVQA result among retrieval-organizing cross-modal methods. Component analysis shows role-specific mechanisms: MARS is the main answer-quality driver, TAM supplies the typed traversal state and Adaptive Routing signal, and SMP enables corpus-dependent reuse, with cross-query cache hit rates ranging from 3.77% to 23.18%.