CLUES-WEASEL: No additional clues required to choose your time series clustering algorithm

This paper introduces an algorithm-agnostic approach to feature-based time series clustering via amortized neural inference. By training neural networks to approximate the optimal partitioning rule from simulated data, the proposed framework reduces reliance on conventional clustering methods, such as $K$-means, $K$-medoids, or hierarchical clustering, and their associated objective functions and heuristics. Leveraging statistical features, such as autocorrelations and quantile autocorrelations, the approach learns a data-driven affinity structure from which clustering partitions can be recovered, without requiring explicit prior specification of cluster shapes or structures. In addition, one version of the method can automatically determine the number of clusters, avoiding ad-hoc selection procedures. Comprehensive empirical studies show that the proposed framework achieves competitive or superior clustering accuracy relative to traditional methods, even in challenging scenarios where competing techniques are provided with the true number of clusters. An application to financial time series of stock returns illustrates its practical utility. By reducing the need for algorithm selection and calibration, the proposed framework opens new possibilities for automated, adaptive, and data-driven clustering of temporal data across scientific and industrial domains.

In many realistic scenarios, large volumes of time series data are generated with limited or expensive annotations. This limitation makes supervised learning methods difficult to apply and leads to the use of unsupervised approaches capable of discovering meaningful structures directly from raw data. Clustering therefore plays a crucial role in organizing time series into groups that share similar temporal patterns, enabling exploratory analysis and downstream tasks without requiring manual labeling. However, existing deep clustering methods often struggle to capture long-range temporal dependencies or rely on architectures with high computational cost. This paper introduces FMMVCC, a Mamba-based deep clustering framework for time series that leverages state space sequence modeling to efficiently learn temporal representations with linear complexity. Additionally, it utilizes multi-view self-supervised learning with temporal masking and augmentations. Experimental evaluation in 15 benchmark datasets proves that FMMVCC consistently outperforms state-of-the-art baselines, achieving the best overall performance in 29 of 60 total metric evaluations and the highest average rank in all tested scenarios.

In recent years, numerous open-source software libraries have been developed for computing sets of features from univariate time series. The type and number of features vary across these feature sets, which have been constructed with varying disciplinary perspectives on quantifying structure in time-series data. To date, the relative strengths and weaknesses of these feature sets on time-series classification problems remains largely unexplored. Here we aimed to understand the relative performance of six open-source feature sets and three baseline feature sets (based on distributional and/or basic spectral structure) across 124 univariate time-series classification problems using a normalization-based approach to problem-level benchmarking that better indexes the relative strengths and weaknesses of different algorithms compared to prior rank-based approaches. Despite their dramatic differences in size, composition, and computation time, we found that feature sets performed relatively similarly overall (85.3% of pairwise comparisons resulted in ties), with the largest feature set, tsfresh, exhibiting the strongest overall performance (29.03% wins across all pairwise comparisons against other feature sets). We also highlighted specific problems on which the specific composition of a given feature set gave it a substantial performance advantage or disadvantage, and problems where simple baselines comprised of Fourier coefficients and quantiles were sufficient to achieve strong performance. Our results demonstrate the need to consider problem-level performance when benchmarking time-series feature sets, and highlight the importance of feature make-up in driving relative classification performance.