HyperSAM: A Promptable Foundation Model for Hyperspectral Remote Sensing

Hyperspectral remote sensing has advanced across diverse deep learning paradigms, including spectral spatial CNNs, Vision Transformers, Mamba, graph neural networks, Kolmogorov Arnold networks, and self supervised masked autoencoding. Yet progress remains hindered by fragmented repositories, incompatible tensor conventions, and non standardized evaluation. Hyperspectral Image Models addresses these challenges through a modular framework unifying 55 representative models across six paradigms with a common registry, automatic 4D/5D tensor adaptation, and standardized constructors. It integrates 24 benchmark scenes from Airborne, Spaceborne, UAV, and Mars CRISM sensors, with caching, label remapping, PCA, explicit band selection or raw spectra, optional spatial max pooling, and arbitrary PxP patch extraction. To prevent inflated accuracy from overlapping windows, it supports class balanced random partitioning and spatially disjoint regional blocking with Chebyshev guard bands that eliminate train test pixel overlap. Experiments use a single config.yaml with deterministic seeds and complete provenance, generating LaTeX benchmark tables and classification maps. Across 1,320 model scene evaluations and 6,600 seeded runs, scene difficulty dominates architecture, with mean accuracy ranging from 96.40% on Botswana to 56.70% on Houston 2018, versus a 15 point spread across paradigm means. No paradigm universally dominates, while sub 1 M parameter models can match architectures two orders of magnitude larger. Code is publicly available at https://github.com/Tanishq251/Hyperspectral-Image-Models.

While hyperspectral imaging provides rich spatial-spectral information across hundreds of narrow wavelength bands for precise material identification, ground-based hyperspectral pre-trained backbones remain absent, constrained by varying spectral configurations across sensors, the scarcity and inconsistency of labels, and the limited scale and scene diversity of existing datasets. To address these challenges and enable universal perception, we propose HyperVision, the first ground-based hyperspectral pre-trained backbone. First, to handle varying spectral configurations, HyperVision adopts a channel-adaptive dynamic embedding mechanism to map heterogeneous inputs into a unified token space. Second, we develop an unsupervised representation learning framework. Specifically, to address label scarcity and inconsistency, a multi-source pseudo-labeling method is introduced to fuse spatial structures from SAM2 and fine-grained spectral material information from HyperFree. Furthermore, to enrich scene diversity and compensate for limited dataset scale, a cross-modal knowledge distillation mechanism is utilized to transfer rich semantic representations from a pre-trained RGB vision model to our backbone. Pre-trained on a collection of 15k images from 26 diverse ground-based datasets, HyperVision demonstrates exceptional generalization. Requiring only efficient head-only adaptation without adjusting backbone parameters, it achieves state-of-the-art performance compared to task-specific methods across three downstream tasks under varying sensor configurations, yielding up to a 16.3% relative improvement in hyperspectral semantic segmentation $\mathrm{Acc}_{\mathrm{M}}$, a 2.1% relative gain in object tracking AUC, and a 35.5% reduction in salient object detection MAE. The source code and pre-trained model will be publicly available on https://github.com/lronkitty/HyperVision .

Several foundation models dedicated to hyperspectral images have recently been made available. These models are trained on large unlabeled datasets and exhibit strong performance on many hyperspectral imaging tasks, such as classification or denoising. Nonetheless, their performance for hyperspectral unmixing -- the task of separating mixed spectra of overlapping materials in a hyperspectral image -- remain understudied. This might partly be due to the fact that most of them rely on vision transformer backbones, including patchification, leading to a feature resolution problem. While hyperspectral unmixing already arises from the low resolution of hyperspectral images, this patchification step potentially makes the problem even more ill-posed. Therefore, in this work, we aim to answer two questions: 1) \emph{how do foundation models perform in hyperspectral unmixing?}; 2) \emph{how to tackle the feature-level loss of resolution?} To answer the first question, we benchmark foundation models for unmixing, showing that they can reach state-of-the-art performance on four hyperspectral unmixing datasets. To answer the second question, we compare several feature upsampling approaches and empirically show that using a simple one can lead to high performance results. The code is available at https://gitlab.telecom-paris.fr/ring/hfm-hsu.git.