TEMPL: A Resource-Efficient and Transparent Model-Free Framework for Pseudo-Label Generation in Material CT Scans

X-ray computed tomography (CT) is a widely used imaging technique that provides detailed examinations into the internal structure of an object with synchrotron CT (SR-CT) enabling improved data quality by using higher energy, monochromatic X-rays. While SR-CT allows for improved resolution, time-resolved experimentation, and reduced imaging artifacts, it also produces significantly larger datasets than conventional CT. Accurate and efficient evaluation of these datasets is a critical component of these workflows; yet is often done manually representing a major bottleneck in the analysis phase. While deep learning has emerged as a powerful tool capable of providing a wide range of purely data-driven solutions, it requires a substantial amount of labeled data for training and manual annotation of SR-CT datasets is impractical in practice. In this paper, we introduce a novel framework that enables automatic segmentation of large, high-resolution SR-CT datasets by eliminating the need to hand label images for deep learning training. First, we generate pseudo labels by clustering on the voxel values identifying regions in the volume with similar attenuation coefficients producing an initial semantic map. Afterwards, we train a segmentation model on the pseudo labels before utilizing the Unbiased Teacher approach to self-correct them ensuring accurate final segmentations. We find our approach improves pixel-wise accuracy and mIoU by 13.31% and 15.94%, respectively, over the baseline pseudo labels when using a magnesium crystal SR-CT sample. Additionally, we extensively evaluate the different components of our workflow including segmentation model, loss function, pseudo labeling strategy, and input type. Finally, we evaluate our approach on to two additional samples highlighting our frameworks ability to produce segmentations that are considerably better than the original pseudo labels.

Automated lesion segmentation in whole-body PET/CT imaging can assist clinicians with cancer detection, staging, and treatment planning across radiotracers and cancer types. However, training lesion segmentation models that capture variations in lesion size, distribution, and appearance requires large annotated datasets, whose creation is both time- and expertise-intensive. As a result, models trained on limited labeled PET/CT data often lack the accuracy and generalizability needed for clinical use. We present FEEDS (Foundation model-Enabled Efficient Data Sampling), a label- and compute-efficient learning strategy that uses vision foundation model embeddings to select the most informative and diverse unlabeled cases for expert annotation. Unlike unsupervised, semi-supervised, and active learning approaches, FEEDS is a one-step training paradigm requiring only a limited, representative training set, making it label- and compute-efficient. We train and validate FEEDS using the AutoPET-III dataset. We test its accuracy and generalizability on three held-out sets: AutoPET-III, DeepPSMA, and an internal Dartmouth-Hitchcock Medical Center dataset. We evaluate clinical utility at the voxel, lesion, and anatomic region level to assess performance in high-risk areas and treatment planning utility. FEEDS outperforms random-sampling-based labeling, pseudolabel-based semi-supervised learning, and training with limited labeled data alone. It generalizes across all three test sets, FDG and PSMA tracers, and multiple diseases, matching fully-labeled (100%) training performance with 70% less annotation burden. FEEDS addresses the challenge of label scarcity in an automatic lesion segmentation framework by providing a practical approach for constructing representative and diverse annotation queues from large, unannotated clinical repositories.

Image segmentation is fundamental to microstructural analysis for defect identification and structure-property correlation, yet remains challenging due to pronounced heterogeneity in materials images arising from varied processing and testing conditions. Conventional image processing techniques often fail to capture such complex features rendering them ineffective for large-scale analysis. Even deep learning approaches struggle to generalize across heterogeneous datasets due to scarcity of high-quality labeled data. Consequently, segmentation workflows often rely on manual expert-driven annotations which are labor intensive and difficult to scale. Using an additive manufacturing (AM) dataset as a case study, we present a semi-automated active learning based segmentation pipeline that integrates a U-Net based convolutional neural network with an interactive user annotation and correction interface and a representative core-set image selection strategy. The active learning workflow iteratively updates the model by incorporating user corrected segmentations into the training pool while the core-set strategy identifies representative images for annotation. Three subset selection strategies, manual selection, uncertainty driven sampling and proposed maximin Latin hypercube sampling from embeddings (SMILE) method were evaluated over six refinement rounds. The SMILE strategy consistently outperformed other approaches, improving the macro F1 score from 0.74 to 0.93 while reducing manual annotation time by about 65 percent. The segmented defect regions were further analyzed using a coupled classification model to categorize defects based on microstructural characteristics and map them to corresponding AM process parameters. The proposed framework reduces labeling effort while maintaining scalability and robustness and is broadly applicable to image based analysis across diverse materials systems.