Graph Embedding

Previous work has shown that node embedding methods can produce different representations and downstream predictions across repeated training runs, even when trained on the same data with identical hyperparameters. However, the role of embedding dimensionality in this instability remains poorly understood. In this work, we systematically analyze how embedding dimensionality affects the stability of embeddings from five widely used node embedding methods: ASNE, DGI, GraphSAGE, node2vec, and VERSE. We evaluate stability from both representational and functional perspectives across a broad range of dimensions, datasets, and repeated training runs, and relate the resulting stability patterns to predictive performance. Our results show that dimensionality can substantially affect embedding stability, although the observed effects depend strongly on the embedding method and stability notion considered. While node2vec and ASNE generally became more stable at higher dimensions, GraphSAGE and VERSE often exhibited non-monotonic behavior or decreasing stability. We further find that dimensions associated with high stability do not necessarily coincide with those yielding the strongest downstream performance. Overall, our findings demonstrate that embedding dimensionality can have a substantial impact on the stability of node embeddings and downstream predictions.

Temporal knowledge graph (TKG) extrapolation is an important task that aims to predict future facts through historical interaction information within KG snapshots. A key challenge for most existing TKG extrapolation models is handling entities with sparse historical interaction. The ontological knowledge is beneficial for alleviating this sparsity issue by enabling these entities to inherit behavioral patterns from other entities with the same concept, which is ignored by previous studies. In this paper, we propose a novel encoder-decoder framework OntoTKGE that leverages the ontological knowledge from the ontology-view KG (i.e., a KG modeling hierarchical relations among abstract concepts as well as the connections between concepts and entities) to guide the TKG extrapolation model's learning process through the effective integration of the ontological and temporal knowledge, thereby enhancing entity embeddings. OntoTKGE is flexible enough to adapt to many TKG extrapolation models. Extensive experiments on five data sets demonstrate that OntoTKGE not only significantly improves the performance of many TKG extrapolation models but also surpasses many state-of-the-art(SOTA) baseline methods.

This study investigates the robustness of shallow graph embedding methods for community detection in the face of network perturbations, specifically node deletions. Graph embedding techniques, which represent nodes as low-dimensional vectors, are widely used for various graph machine learning tasks due to their ability to capture structural properties of networks effectively. However, the impact of perturbations on the performance of these methods remains relatively understudied. The research considers state-of-the-art shallow graph embedding methods from two families: matrix factorization (e.g., LE, LLE, HOPE, M-NMF) and random walk-based (e.g., DeepWalk, LINE, node2vec). Through experiments conducted on both synthetic and real-world networks, the study reveals varying degrees of robustness within each family of shallow graph embedding methods. The robustness is found to be influenced by factors such as network size, initial community partition strength, and the type of perturbation. Notably, node2vec and LLE consistently demonstrate higher robustness for community detection across different scenarios, including networks with degree and community size heterogeneity. These findings highlight the importance of selecting an appropriate shallow graph embedding method based on the specific characteristics of the network and the task at hand, particularly in scenarios where robustness to perturbations is crucial.

Vertex-level clustering for directed graphs (digraphs) remains challenging as edge directionality breaks the key assumptions underlying popular spectral methods, which also incur the overhead of eigen-decomposition. This paper proposes Parametrized Power-Iteration Clustering (ParPIC), a random-walk-based clustering method for weakly connected digraphs. This builds over the Power-Iteration Clustering paradigm, which uses the rows of the iterated diffusion operator as a data embedding. ParPIC has three important features: the use of parametrized reversible random walk operators, the automatic tuning of the diffusion time, and the efficient truncation of the final embedding, which produces low-dimensional data representations and reduces complexity. Empirical results on synthetic and real-world graphs demonstrate that ParPIC achieves competitive clustering accuracy with improved scalability relative to spectral and teleportation-based methods.