cs.LGSep 26, 2025

Rotary Position Encodings for Graphs

Authors: Isaac ReidArijit SehanobishCederik HöfsBruno MlodozeniecLeonhard VulpiusFederico BarberoAdrian WellerKrzysztof Choromanski+2 more

Organizations: University of Cambridge · Google DeepMind · Independent Researcher · Max Planck Institute for Intelligent Systems · University of Oxford · Alan Turing Institute

Abstract

We study the extent to which rotary position encodings (RoPE), a recent transformer position encoding algorithm broadly adopted in large language models (LLMs) and vision transformers (ViTs), can be applied to graph-structured data. We find that rotating tokens depending on the spectrum of the graph Laplacian efficiently injects structural information into the attention mechanism, boosting performance in synthetic and real-world graph learning tasks. This approach, coined Wave-Induced Rotary Encodings (WIRE), enjoys intriguing theoretical properties: it recovers regular RoPE on grids, and depends asymptotically on the graph effective resistance. Unlike bias-based relative position encodings, WIRE is compatible with linear attention.

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