cs.AIFeb 16, 2026

Diagnosing Knowledge Conflict in Multimodal Long-Chain Reasoning

Authors: Jing Tang, Kun Wang, Haolang Lu, Hongjin Chen, KaiTao Chen, Zhongxiang Sun, Qiankun Li, Lingjuan Lyu, 

Organizations: Huazhong University of Science and Technology · Nanyang Technological University · Beijing University of Posts and Telecommunications · Renmin University of China · 

Abstract

Multimodal large language models (MLLMs) in long chain-of-thought reasoning often fail when different knowledge sources provide conflicting signals. We formalize these failures under a unified notion of knowledge conflict, distinguishing input-level objective conflict from process-level effective conflict. Through probing internal representations, we reveal that: (I) Linear Separability: different conflict types are explicitly encoded as linearly separable features rather than entangled; (II) Depth Localization: conflict signals concentrate in mid-to-late layers, indicating a distinct processing stage for conflict encoding; (III) Hierarchical Consistency: aggregating noisy token-level signals along trajectories robustly recovers input-level conflict types; and (IV) Directional Asymmetry: reinforcing the model's implicit source preference under conflict is far easier than enforcing the opposite source. Our findings provide a mechanism-level view of multimodal reasoning under knowledge conflict and enable principled diagnosis and control of long-CoT failures.

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