An Evaluation of Context Length Extrapolation in Long Code via Positional Embeddings and Efficient Attention

Rapidly increasing context lengths have led to the assumption that large language models (LLMs) can directly reason over entire codebases. Concurrently, recent advances in LLMs have enabled strong performance on software engineering benchmarks, particularly when paired with agentic workflows. In this work, we systematically evaluate whether current LLMs can reliably perform long-context code debugging and patch generation. Using SWE-bench Verified as a controlled experimental setting, we first evaluate state-of-the-art models within an agentic harness (mini-SWE-agent), where performance improves substantially: GPT-5-nano achieves up to a 31% resolve rate on 100 samples, and open-source models such as Deepseek-R1-0528 obtain competitive results. However, token-level analysis shows that successful agentic trajectories typically remain under 20k-30k tokens, and that longer accumulated contexts correlate with lower success rates, indicating that agentic success primarily arises from task decomposition into short-context steps rather than effective long-context reasoning. To directly test long-context capability, we construct a data pipeline where we artificially inflate the context length of the input by placing the relevant files into the context (ensuring perfect retrieval recall); we then study single-shot patch generation under genuinely long contexts (64k tokens). Despite this setup, performance degrades sharply: Qwen3-Coder-30B-A3B achieves only a 7% resolve rate at 64k context, while GPT-5-nano solves none of the tasks. Qualitative analysis reveals systematic failure modes, including hallucinated diffs, incorrect file targets, and malformed patch headers. Overall, our findings highlight a significant gap between nominal context length and usable context capacity in current LLMs, and suggest that existing agentic coding benchmarks do not meaningfully evaluate long-context reasoning.

As real-world applications increasingly require processing inputs of 100k+ tokens, the gap between context length and inference efficiency has become a critical bottleneck. Context compression offers a way to reduce prefill costs while preserving task accuracy. However, existing training-free attention-based methods leave substantial gaps in demanding long-context tasks such as code reasoning. We present LongAttnComp, a long-context adaptation of AttnComp that fine-tunes a lightweight cross-attention scoring layer and introduces tokenlevel chunking, a token-budget top-p algorithm, positional reordering, and a formatagnostic query parser. We further design a two-stage fine-tuning recipe for the compressor: Stage 1 builds a general retrieval foundation from NIAH-style data, and Stage 2 extends it with multi-hop and reasoning data for broader long-context task coverage. On InfiniteBench Code-Debug, LongAttnComp matches or exceeds full-context accuracy, substantially outperforms training-free baselines, and transfers across four target models from three families. On LongBench v2, the two-stage recipe largely closes the Stage 1 gap on multi-document reasoning while preserving Code-Debug performance.

Extending the context window of large language models typically requires training on sequences at the target length, incurring quadratic memory and computational costs that make long-context adaptation expensive and difficult to reproduce. We propose EndPrompt, a method that achieves effective context extension using only short training sequences. The core insight is that exposing a model to long-range relative positional distances does not require constructing full-length inputs: we preserve the original short context as an intact first segment and append a brief terminal prompt as a second segment, assigning it positional indices near the target context length. This two-segment construction introduces both local and long-range relative distances within a short physical sequence while maintaining the semantic continuity of the training text--a property absent in chunk-based simulation approaches that split contiguous context. We provide a theoretical analysis grounded in Rotary Position Embedding and the Bernstein inequality, showing that position interpolation induces a rigorous smoothness constraint over the attention function, with shared Transformer parameters further suppressing unstable extrapolation to unobserved intermediate distances. Applied to LLaMA-family models extending the context window from 8K to 64K, EndPrompt achieves an average RULER score of 76.03 and the highest average on LongBench, surpassing LCEG (72.24), LongLoRA (72.95), and full-length fine-tuning (69.23) while requiring substantially less computation. These results demonstrate that long-context generalization can be induced from sparse positional supervision, challenging the prevailing assumption that dense long-sequence training is necessary for reliable context-window extension. The code is available at https://github.com/clx1415926/EndPrompt.