Semantic Chameleon: Corpus-Dependent Poisoning Attacks and Defenses in RAG Systems

Retrieval-Augmented Generation (RAG) mitigates LLM hallucinations but introduces a critical vulnerability: corpus integrity. We present SilentRetrieval, a two-stage data poisoning attack that hijacks RAG systems through adversarially crafted yet fluent documents. Stage 1 uses Coordinated Beam Search, a multi-token joint optimization method with a fluency-similarity objective, to keep a poisoned host document retrievable while constraining perplexity. Stage 2 uses Context-Adaptive Trigger Generation, a lightweight trigger-fusion step driven by a frozen LLM, to integrate manipulation triggers into document content. Under a one-poisoned-document-per-query evaluation with synthetic target answers, SilentRetrieval achieves 84.6%/81.3% HR@10 and 57.5%/54.8% ASR-LLM on Natural Questions and MS MARCO, while maintaining near-benign perplexity. Cross-model evaluation across four target LLMs shows nontrivial effectiveness under a fixed trigger generator, and transfer tests against unseen retrievers, including ColBERT and commercial embedding models, yield 64.7% average HR@10 under the same injected-corpus protocol. In a sampled Wikipedia-scale evaluation, SilentRetrieval retains 74.2% HR@10 at a 0.016% poisoning ratio. Combined retrieval-side and generation-side defenses reduce attack success substantially but incur a latency trade-off. Human evaluation shows substantially lower flag rates than disfluent baselines, while remaining numerically more suspicious than benign content at the current sample size.

Retrieval-Augmented Generation (RAG) systems ground large language models (LLMs) in external corpora, but this reliance exposes them to corpus poisoning: maliciously injected passages that manipulate retrieved evidence. We introduce RAGuard, a layered defense against factual corpus-poisoning attacks on RAG pipelines. The first layer adversarially fine-tunes a dense retriever on synthetic poisoned documents (fabricated facts, contradictions, and reasoning traps), teaching it to downrank malicious passages before generation. The second layer, the Zero-Knowledge Inference Patch ZKIP, is a label-free, black-box filter: for each retrieved document, it performs a leave-one-out decode and scores the document by the semantic shift and output-entropy change that its removal induces. ZKIP requires no poison labels, no ground-truth answers, and no access to model internals; it compares the model's own answers under counterfactual contexts. On poisoned Natural Questions at 5--30% poison ratios, adversarial retriever training alone reduces but does not eliminate attack success, while ZKIP drives the measured attack success rate to 0.000 in every defended configuration, keeping Recall@5 within 0.03 of the clean-corpus baseline. Supervised analyses on both Natural Questions and BEIR (NFCorpus) confirm that the counterfactual signals ZKIP relies on carry learnable poison structure. The defense costs $k{+}1$ generator passes per query ($6\times$ for $k{=}5$); we analyze batching and early-stopping approximations that reduce this overhead. We also show that keyword-preserving poisons leave lexical retrievers such as BM25 essentially unaffected, an observation that delineates the boundary of the threat model. Code, datasets, and evaluation harnesses are released for reproducibility.

Retrieval-augmented generation (RAG) augments LLMs with external documents, but public or user-editable sources expose RAG systems to data poisoning: attackers can inject malicious documents to steer outputs toward targeted answers. Existing poisoning attacks often rely on query inclusion, inserting the target query into poisoned documents to improve retrieval; however, this creates lexical and embedding-space artifacts that make them easy to filter. We propose CamoDocs, a poisoning attack that avoids direct query inclusion by camouflaging adversarial documents among benign content. CamoDocs chunks synthesized benign and adversarial drafts, replaces selected tokens in benign chunks with dispersion tokens that spread poisoned-document embeddings, and applies coherence filtering to limit readability degradation. Across seven RAG defenses, three open-weight LLMs, and three benchmarks, CamoDocs achieves strong average ASR while avoiding query-overlap artifacts exploited by simple query detection. It also remains effective against proprietary models, achieving average ASRs of 61.80% on GPT-5.4-mini and 55.09% on Claude-Haiku-4.5. Finally, we show that erasure-heavy clustering defenses such as TrustRAG can reduce ASR, but only with substantial utility drops on retrieval-dependent benchmarks such as NeoQA. Code is available at https://github.com/jaewonalive/CamoDocs.