BioVITA: Biological Dataset, Model, and Benchmark for Visual-Textual-Acoustic Alignment

Animal vocalizations provide crucial insights for wildlife assessment, particularly in complex environments such as forests, aiding species identification and ecological monitoring. Recent advances in deep learning have enabled automatic species classification from their vocalizations. However, classifying species unseen during training remains challenging. To address this limitation, we introduce AnimalCLAP, a taxonomy-aware language-audio framework comprising a new dataset and model that incorporate hierarchical biological information. Specifically, our vocalization dataset consists of 4,225 hours of recordings covering 6,823 species, annotated with 22 ecological traits. The AnimalCLAP model is trained on this dataset to align audio and textual representations using taxonomic structures, improving the recognition of unseen species. We demonstrate that our proposed model effectively infers ecological and biological attributes of species directly from their vocalizations, achieving superior performance compared to CLAP. Our dataset, code, and models will be publicly available at https://dahlian00.github.io/AnimalCLAP_Page/.

Accurate biodiversity identification from large-scale field data is a foundational problem with direct impact on ecology, conservation, and environmental monitoring. In practice, the core task is taxonomic prediction - inferring order, family, genus, or species from imperfect inputs such as specimen images, DNA barcodes, or both. Existing multimodal methods often treat taxonomy as a flat label space and therefore fail to encode the hierarchical structure of biological classification, which is critical for robustness under noise and missing modalities. We present two end-to-end variants for hierarchy-aware multimodal learning: CLiBD-HiR, which introduces Hierarchical Information Regularization (HiR) to shape embedding geometry across taxonomic levels, yielding structured and noise-robust representations; and CLiBD-HiR-Fuse, which additionally trains a lightweight fusion predictor that supports image-only, DNA-only, or joint inference and is resilient to modality corruption. Across large-scale biodiversity benchmarks, our approach improves taxonomic classification accuracy by over 14 percent compared to strong multimodal baselines, with particularly large gains under partial and corrupted DNA conditions. These results highlight that explicitly encoding biological hierarchy, together with flexible fusion, is key for practical biodiversity foundation models.

Fine-grained understanding and species-specific multimodal question answering are vital for advancing biodiversity conservation and ecological monitoring. However, existing multimodal large language models face challenges when it comes to specialized topics like avian species, making it harder to provide accurate and contextually relevant information in these areas. To address this limitation, we introduce the MAviS-Dataset, a large-scale multimodal avian species dataset that integrates image, audio, and text modalities for over 1,000 bird species, comprising both pretraining and instruction-tuning subsets enriched with structured question-answer pairs. Building on the MAviS-Dataset, we introduce MAviS-Chat, a multimodal LLM that supports audio, vision, and text and is designed for fine-grained species understanding, multimodal question answering, and scene-specific description generation. Finally, for quantitative evaluation, we present MAviS-Bench, a benchmark of over 25,000 QA pairs designed to assess avian species-specific perceptual and reasoning abilities across modalities. Experimental results show that MAviS-Chat outperforms the baseline MiniCPM-o-2.6 by a large margin, achieving state-of-the-art open-source results and demonstrating the effectiveness of our instruction-tuned MAviS-Dataset. Our findings highlight the necessity of domain-adaptive multimodal LLMs for ecological applications.