Steering Sparse Autoencoder Latents to Control Dynamic Head Pruning in Vision Transformers (Student Abstract)

Vision foundation models, such as DINOv2, learn highly expressive representations but rely on massive, opaque architectures that demand substantial computational power and memory. To provide an interpretable-guided and efficient solution to this issue, we first propose a spectral analysis and new visualization technique for individual attention heads based on the Laplacian eigenvectors of their attention maps. Building upon recent observations regarding the block structure of Vision Transformers, we perform semantic clustering of attention heads and identify functional redundancies. Leveraging these insights, we introduce SAPER (Soft Attention PrunER), an end-to-end differentiable pruning framework based on the LapSum Soft Top-K approach. Extensive experiments on ImageNet-1K demonstrate that SAPER achieves a highly favorable accuracy-efficiency trade-off, outperforming the competitive RAPTOR baseline in FLOPs reduction while preserving strong classification performance.

Vision Transformers require significant computational resources and memory bandwidth, severely limiting their deployment on resource-constrained hardware. Most structured pruning methods reduce theoretical cost effectively, yet they typically operate at a single structural granularity and depend on multi-stage pipelines with importance ranking, auxiliary solvers or post-hoc magnitude thresholding, followed by a separate fine-tuning phase to recover accuracy. We propose Hierarchical Auto-Pruning (HiAP), which casts ViT pruning as a single budget-aware learning problem and jointly allocates sparsity across four granularities in one end-to-end phase. HiAP introduces stochastic Gumbel-Sigmoid gates at macro level (attention heads and FFN blocks) and micro level (intra-head dimensions and FFN neurons), and trains them against the task loss together with an analytical MAC cost term. Two penalty weights set how much compute is removed, while the gates gradually harden into a dense, smaller sub-network at convergence. It does not require importance heuristics, ranking metrics, auxiliary solvers or secondary fine-tuning. On ImageNet, HiAP compresses DeiT-Base to 7.4G MACs at 80.88% top-1 80.40% at 7.8G without distillation and DeiT-Small to 3.1G at 79.33%, competitive with substantially more complex pipelines at matched compute. The structurally pruned network can be accelerated natively on stock kernels, and more than 90% of the theoretical MAC reduction is realized as measured throughput at batch 256 on an A100.

Mechanistic interpretability has recently expanded to Vision Transformers (ViTs), with Sparse Autoencoders (SAEs) increasingly used as post-hoc tools to decompose internal representations into sparse and more interpretable features. However, because post-hoc SAEs are trained on frozen representations after the ViT has already been optimized, their latent features are not directly aligned with the downstream classification objective. We introduce SpIn-ViT, a framework that jointly trains a pretrained ViT and a modified SAE end-to-end, directly aligning sparse patch-level representations with image classification. SpIn-ViT learns semantically coherent neuron activations that localize meaningful image regions while maintaining competitive predictive performance. We evaluate SpIn-ViT across nine image-classification benchmarks using classification accuracy, quantitative interpretability metrics, AI-based and Human evaluations. Compared with the previous state-of-the-art post-hoc SAE method, SpIn-ViT achieves 8.84% higher average classification accuracy, an AI-based interpretability score nearly four times as high, and a human-evaluation score more than twice as high. We further extract interpretable rule-sets using the SAE neurons to create neurosymbolic models which achieve 5.97% higher average classification accuracy while requiring a 58.8% smaller rule-set than the neurosymbolic models created from the SOTA post-hoc SAE method.