Broken by Default: A Formal Verification Study of Security Vulnerabilities in AI-Generated Code

LLM-based coding assistants are seeing rapid adoption, offering substantial gains in developer productivity. As organizations increasingly ship code these agents produce, the security of that code becomes critical. Prior work has shown that minor prompt perturbations degrade the functional correctness of LLM-generated code, but whether they also compromise code security has remained unstudied. We apply token-level mutations to prompts across three models and five programming languages, and show that mutations as small as a single-character change can flip generated code from secure to vulnerable. Probing the models' hidden states reveals that this fragility is partially encoded in prompt representations, but unevenly so. Input-handling vulnerabilities, where the model omits validation or sanitization, are more predictable (mean AUC 0.753) than secure-defaults vulnerabilities, where insecure code stems from one local choice such as a weak algorithm or unsafe parameter (mean AUC 0.674). These results show that the threat model for LLM-assisted coding extends beyond prompt injection to ordinary prompt variation, and indicate that input-handling flaws can be caught before generation while secure-defaults flaws require intervention during decoding.

LLM coding agents now generate code at an unprecedented scale, yet LLM-generated code introduces cybersecurity vulnerabilities into codebases without human involvement. Even when frontier models are explicitly asked to write secure production code with relevant weaknesses to avoid in context, we find that they still produce verifiable vulnerabilities on average 23% of the time across a corpus of 250 benign coding prompts. We introduce SecureForge, an automated pipeline that both audits security risks of frontier models and produces auditing-informed secure system prompts that reduce output security vulnerabilities while maintaining unit test performance. SecureForge first identifies benign prompts that produce statically detectable vulnerabilities, and then amplifies them into a large synthetic prompt corpus of diverse scenarios using a Markovian sampling technique to jointly maintain error rates and prompt diversity. This corpus is then used to iteratively optimize the system prompts to reduce output security vulnerabilities. On frontier models, SecureForge yields a statistically significant Pareto improvement in both unit test success and output security, with output vulnerabilities reduced by up to 48%. The resulting system prompts transfer zero-shot to in-the-wild coding agent prompts, without any exposure to real user prompt distributions during optimization.

We introduce SecCodeBench-V2, a publicly released benchmark for evaluating Large Language Model (LLM) copilots' capabilities of generating secure code. SecCodeBench-V2 comprises 98 generation and fix scenarios derived from Alibaba Group's industrial productions, where the underlying security issues span 22 common CWE (Common Weakness Enumeration) categories across five programming languages: Java, C, Python, Go, and JavaScript. SecCodeBench-V2 adopts a function-level task formulation: each scenario provides a complete project scaffold and requires the model to implement or patch a designated target function under fixed interfaces and dependencies. For each scenario, SecCodeBench-V2 provides executable proof-of-concept (PoC) test cases for both functional validation and security verification. All test cases are authored and double-reviewed by security experts, ensuring high fidelity, broad coverage, and reliable ground truth. Beyond the benchmark itself, we build a unified evaluation pipeline that assesses models primarily via dynamic execution. For most scenarios, we compile and run model-generated artifacts in isolated environments and execute PoC test cases to validate both functional correctness and security properties. For scenarios where security issues cannot be adjudicated with deterministic test cases, we additionally employ an LLM-as-a-judge oracle. To summarize performance across heterogeneous scenarios and difficulty levels, we design a Pass@K-based scoring protocol with principled aggregation over scenarios and severity, enabling holistic and comparable evaluation across models. Overall, SecCodeBench-V2 provides a rigorous and reproducible foundation for assessing the security posture of AI coding assistants, with results and artifacts released at https://alibaba.github.io/sec-code-bench. The benchmark is publicly available at https://github.com/alibaba/sec-code-bench.