Generating Synthetic Doctor-Patient Conversations for Long-form Audio Summarization
Authors: Yanis Labrak, David Grünert, Séverin Baroudi, Jiyun Chun, Pawel Cyrta, Sergio Burdisso, Ahmed Hassoon, David Liu, Adam Rothschild, Reed Van Deusen, Petr Motlicek, Andrew Perrault, Ricard Marxer, Thomas Schaaf
Organizations: Idiap Research Institute, Switzerland · University of Zurich, Switzerland · Université de Toulon, Aix Marseille Univ, LIS, CNRS, France · The Ohio State University, USA · Stenograf, Poland · Johns Hopkins University Bloomberg School of Public Health, USA · Colorado School of Mines, USA · Allegheny Health Network, USA · University of Pittsburgh Medical Center, USA · ILLS, CNRS, France · Solventum, USA · Carnegie Mellon University, USA
Long-context audio reasoning is underserved in both training data and evaluation. Existing benchmarks target short-context tasks, and the open-ended generation tasks most relevant to long-context reasoning pose well-known challenges for automatic evaluation. We propose a synthetic data generation pipeline designed to serve both as a training resource and as a controlled evaluation environment, and instantiate it for first-visit doctor-patient conversations with SOAP note generation as the task. The pipeline has three stages, persona-driven dialogue generation, multi-speaker audio synthesis with overlap/pause modeling, room acoustics, and sound events, and LLM-based reference SOAP note production, built entirely on open-weight models. We release 8,800 synthetic conversations with 1.3k hours of corresponding audio and reference notes. Evaluating current open-weight systems, we find that cascaded approaches still substantially outperform end-to-end models.
Figures & tables
Dataset
Doctor
Patient
Num Turns
Turn Length
Fog Index
Turn Length
Fog Index
Ours
49.9±16.0
10.4
56.0±15.2
6.9
28.4±7.5
PriMock57
18.8±4.7
6.6
12.3±5.8
5.5
97.3±17.7
Mocks
29.6±6.3
7.0
13.6±3.1
7.0
54±6.2
Table 1: Dialogue statistics comparing our generated synthetic conversations against baseline and reference datasets.
Figure 1: Overview of the audio generation pipeline, integrating Text-To-Speech, sound event generation, temporal scene composition, and environmental acoustic simulation.
Train
Dev
Test
Overall
Personas (Doc/Pat)
60/120
20/20
20/60
100/200
Dialogues
7,200
400
1,200
8,800
Hours
1,087
59
183
1,329
Words in dialogues
10.9M
582K
1.8M
13.3M
Turns/dialogue
28.4
28.7
28.0
28.4
Duration/dialogue (s)
544
530
548
544
Table 2: Synth-DoPaCo dataset statistics.
Architecture
Faith.
Cov.
Struct.
Conc.
Qwen3
-ASR+Thinking
3.1 (±0.7)
3.9 (±0.9)
4.0 (±1.0)
3.4 (±0.8)
-Omni-Instruct
2.7 (±0.8)
4.3 (±0.8)
4.3 (±0.9)
3.0 (±0.7)
-Omni-Thinking
2.7 (±0.8)
4.2 (±0.8)
4.0 (±0.9)
3.1 (±0.7)
Whisper Large V3+
3.3 (±0.8)
4.3 (±0.8)
4.0 (±0.9)
3.5 (±0.7)
Qwen3-Thinking
Reference (Oracle
5.0 (±0.2)
4.2 (±0.9)
4.5 (±0.9)
3.8 (±0.8)
Table 3: Comparison of different note generation methods. Metrics: (Faith)fulness, (Cov)erage, (Struct)ure, and (Conc)iseness
Model
R-2
R-3
R-L
Open
#Wrd
Whisper+Qwen3
11.8±0.3
4.16±0.20
22.7±0.4
29.1±0.5
255
Qwen3-ASR+Qwen3
11.0±0.3
3.84±0.22
21.9±0.5
27.9±0.6
254
Qwen3-Omni-Thinking
12.7±0.3
5.03±0.21
21.3±0.4
27.5±0.5
487
Qwen3-Omni-Instruct
14.3±0.4
6.24±0.27
22.9±0.4
30.9±0.6
545
Table 4: Dev-set SOAP-note F1 (%); ± is the bootstrapped 95% CI half-width.
With the advent of Large Language Models and its instruction following capabilities a promising application is the task of summarization. Within this domain of task the extractive sub-task of clinical protocolling has emerged as a topic of particular interest as it can significantly reduce the downtime and protocolling burden of health-care workers thus enabling them to focus on their core work helping humans. A further step towards automation is the direct generation of clinical notes from speech without intermediate transcripts, reducing processing time while preserving information such as coughing or other paralinguistic cues that may be lost in transcript-based systems. To this end, we present KIT's submission to this years BeTraC challenge in the lightweight track. Our main contribution is a scalable data augmentation pipeline that unifies heterogeneous medical dialogue datasets through synthetic speech generation and automatically generated SOAP supervision, enabling robust adaptation of a speech foundation model for end-to-end speech-to-SOAP generation.
Enes Yavuz Ugan, Fabian Retkowski, Yuka Ko +4
ISL, Karlsruhe Institute of Technology · AI4LT, Karlsruhe Institute of Technology · InterACT, Carnegie Mellon University
This paper describes TalTech's submissions to the Beyond Transcription Challenge (BeTraC), which requires generating SOAP notes directly from long doctor-patient conversation recordings, without intermediate transcription. After screening open-weight speech LLMs for long-audio robustness, we adapted Voxtral Mini (lightweight track) and Voxtral Small (heavyweight track) with LoRA supervised fine-tuning followed by DAPO reinforcement learning that uses the challenge metric, Open Medical Concept F1, as its reward. Our systems ranked first in both tracks, and an independent LLM-as-a-judge evaluation showed the lowest hallucination rate among all submissions, indicating that reinforcement learning against a concept-matching metric need not compromise factual reliability. We also find that fine-tuning on text transcripts transfers well to speech input and appears to improve robustness on out-of-domain real recordings.
Automating clinical documentation from long-form doctor-patient conversations remains challenging for modern audio-language models. While cascaded ASR systems perform well, end-to-end (E2E) models often struggle with information loss and hallucinations on extended audio. For the BeTraC 2026 challenge, the ASLP team presents a fully E2E multimodal system that generates structured SOAP notes directly from audio, bypassing intermediate transcripts. We constructed a 1.41-million-sample multi-task corpus and applied a multi-stage pipeline: domain pre-training, supervised fine-tuning, and reward optimization. Evaluating the architecture under both Lightweight (3B) and Heavyweight (30B) constraints reveals that each training stage progressively enhances performance. Furthermore, scaling to 30B parameters substantially boosts concept extraction and summarization quality. Ultimately, our E2E systems consistently outperform representative cascaded ASR+LLM baselines, proving the efficacy of direct multimodal optimization for clinical documentation.