The correlation between insect morphological traits and climate has been documented in physiological studies, but such studies remain limited by the time-consuming nature of the data analysis. In particular, the open source datasets often lack annotations of species' morphological traits, making dedicated annotations campaigns necessary; these efforts are typically local in scale and costly. In this paper, we propose a pipeline to identify and segment body parts of Odonates (dragonflies and damselflies) using deep neural networks, with the ultimate goal of extracting body parts' colouration. The pipeline is trained on a limited annotated dataset and refined with pseudo supervised data. We show that, by using open source images from citizen science platforms, our approach can segment each visible subject (Odonates) into head, thorax, abdomen, and wings and then extract a colour palette for each body part. This will enable large-scale statistical analysis of ecological correlations (e.g., between colouration and climate change, habitat loss, or geolocation) which are crucial for quantifying and assessing ecosystem biodiversity status.
Declining insect populations make reliable biodiversity monitoring increasingly urgent, yet monitoring of insect biodiversity is hampered by a lack of standardised data and by costly and time-consuming manual identification by expert entomologists. Deep learning-based image classifiers, processing data from automated non-lethal camera traps, have the potential to transform and scale insect biodiversity monitoring. However, challenges remain in acquiring expert-annotated datasets, developing model architectures that generalise well across diverse taxonomic levels and training models on highly imbalanced data. Hierarchical data also benefits from designing models that default to higher-confidence, coarser-level predictions, when uncertain about finer taxonomic levels. In this paper we address these challenges with a deep learning-based hierarchical classification model. First, we present a manually curated, long-tailed dataset of around one million images of insects, extracted from 1,801 camera-trap video recordings and annotated with a five-level, 34-class hierarchy. Further, we adapt a hierarchical classification model architecture to a five-level variable-depth hierarchy, with class-balanced weighting. Our model improves on non-hierarchical classifiers by leveraging biological taxonomy to extract granularity-specific visual features and makes hierarchy-consistent predictions to the deepest taxonomic level that meets a confidence threshold (T = 0.6). Our model achieved a per-level accuracy of 80-99% on test data, across five levels of hierarchy. Furthermore ...
Passive acoustic monitoring holds great promise for ecological inference, yet existing automated tools are typically narrowly trained and non-transferable. We address these limitations with PULSE, a semi-supervised, multi-task framework for Orthoptera bioacoustics, combining weakly-supervised species classification, self-supervised learning on unlabelled field audio, and knowledge distillation from a general-purpose bioacoustic model. Our domain-adapted specialist model outperforms a state-of-the-art general model across all metrics (macro F1: 0.21 vs. 0.07; AUC: 0.74 vs. 0.45; AP: 0.32 vs. 0.19), with active learning further raising F1 to 0.34 and AUC to 0.84. Beyond classification, the learned embeddings encode ecologically meaningful structure, exposed through an interactive visualisation tool for ecological discovery.
Population-level morphometric measurements underpin ecological and evolutionary studies but traditionally require controlled imaging or physical specimen handling, limiting scalability. We present WildProp, a training-free framework that estimates wildlife body proportion distributions directly from large-scale, unconstrained image repositories. We cast morphometric estimation as a retrieval-driven correspondence problem: given a single user-annotated canonical image, WildProp performs pose-aware retrieval using foundation model features, transfers part endpoints via dense patch-level matching, filters predictions using geometric consistency, and aggregates measurements across retrieved images to estimate population-level ratio distributions. Unlike supervised keypoint pipelines, our approach adapts to arbitrary species and user-defined parts without per-species training. Evaluations on three large morphometric datasets spanning birds and amphibians show median relative errors of 10-20%. We further highlight the broad applicability of our approach through a number of case studies measuring various proportions across diverse taxa, including birds, frogs, insects, and flowers. Ablations demonstrate that pose-aware retrieval is critical for stable estimation, while robust aggregation mitigates keypoint and pose noise. Our results indicate that carefully curated 2D correspondences over web-scale imagery can provide scalable morphometric proxies for comparative and subgroup analyses across taxa, geography, and seasonality.