InstructSAM: Segment Any Instance with Any Instructions
Authors: Yuqian Yuan, Wentong Li, Zhaocheng Li, Yutong Lin, Juncheng Li, Siliang Tang, Jun Xiao, Yueting Zhuang, +1 more
Abstract
In this paper, we introduce InstructSAM, a unified and streamlined framework designed for multi-instance segmentation under arbitrary instructions. We formulates instruction-driven instance segmentation as a set-structured query prediction problem and propose an explicit reasoning-to-instance query interface that elegantly bridges a vision-language model (VLM) and SAM3. Specifically, a bank of learnable instance queries is injected into the VLM and contextualized with instruction and visual information, enabling each query to serve as an instance-aware slot. A hybrid-attention mechanism further promotes interaction among these queries, visual tokens, and instruction tokens, improving instance enumeration and reducing duplicate predictions. The resulting LLM-conditioned queries are projected into SAM3's detector query space to drive accurate multi-instance segmentation in a single forward pass. This design equips SAM3 with high-level instruction understanding, compositional reasoning, and instance-level set prediction without modifying its core architecture. To support training and evaluation, we further construct Inst2Seg, a high-quality and large-scale instruction-based instance segmentation dataset and benchmark that couples free-form instructions with instance-level masks. Extensive experiments show that only 2B-scale InstructSAM achieves strong results across complex instruction-driven and phrase-level referring segmentation benchmarks, outperforming prior end-to-end methods and SAM3's agentic pipeline while enabling efficient single-pass multi-instance prediction.
Language-guided segmentation transcends the scope limitations of traditional semantic segmentation, enabling models to segment arbitrary target regions based on natural language instructions. Existing approaches typically adopt a two-stage framework: employing Multimodal Large Language Models (MLLMs) to interpret instructions and generate visual prompts, followed by foundational segmentation models (e.g., SAM) to produce masks. However, due to the limited spatial grounding capabilities of off-the-shelf MLLMs, these methods often rely on extensive training on large-scale datasets to achieve satisfactory accuracy. While recent advances have introduced reasoning mechanisms to improve performance, they predominantly operate within the textual domain, performing chain-of-thought reasoning solely based on abstract text representations without direct visual feedback. In this paper, we propose Seg-Agent, a completely training-free framework that pioneers Explicit Multimodal Chain-of-Reasoning. Unlike prior text-only reasoning, our approach constructs an interactive visual reasoning loop comprising three stages: generation, selection, and refinement. Specifically, we leverage Set-of-Mark (SoM) visual prompting to render candidate regions directly onto the image, allowing the MLLM to ``see'' and iteratively reason about spatial relationships in the visual domain rather than just the textual one. This explicit multimodal interaction enables Seg-Agent to achieve performance comparable to state-of-the-art training-based methods without any parameter updates. Furthermore, to comprehensively evaluate generalization across diverse scenarios, we introduce Various-LangSeg, a novel benchmark covering explicit semantic, generic object, and reasoning-guided segmentation tasks. Extensive experiments demonstrate the effectiveness and robustness of our method.
Open-vocabulary segmentation models such as SAM3 perform well across broad categories via text prompting, yet degrade when target classes are visually underrepresented in pretraining or depart from canonical depictions-limitations text prompts cannot resolve spatially. We present SegRAG, a training-free retrieval-augmented segmentation framework that grounds SAM3 with class-specific point prompts derived from a curated DINOv3 feature bank. Offline, dense patch-level descriptors are extracted from annotated references and filtered by Intra-Class Cohesion Distillation (ICCD), retaining only prototypes that reliably retrieve within-class foreground. At inference, Topographic Similarity Grounding (TSG) computes a cosine-similarity landscape against retrieved prototypes, identifies coherent high-confidence regions via connected-component analysis, and extracts peak locations through non-maximum suppression. The resulting point prompts are delivered jointly with class-name text in a single SAM3 forward pass. On four standard benchmarks, SegRAG consistently outperforms the text-only baseline, gaining up to +3.92 mIoU on LVIS. On AgML agricultural benchmarks under zero-shot domain transfer, it raises mean IoU from 25.27 to 59.24 (+33.97) and recovers individual classes from zero to over 95 mIoU. Ablations confirm that ICCD, TSG, and joint prompting each contribute independently and compound when combined. Code is available at (https://github.com/boudiafA/SegRAG).
Promptable foundation models such as the Segment Anything Model (SAM) produce high-quality masks but remain semantically blind, relying on external prompts to specify categories. Existing vision-language approaches address this limitation by using external prompt coupling, where a vision-language model generates spatial prompts for SAM as a separate stage. We propose CLIP-Guided SAM, a parameter-efficient segmentation framework built on internal semantic conditioning. Instead of using semantic signals only to generate prompts, we inject CLIP-derived text, vision, and similarity features directly into SAM's image encoder through lightweight multi-modal semantic adapters. These adapters condition SAM's internal feature representations, allowing semantic information to influence mask prediction while preserving SAM's original promptable interface. Our framework is designed for low labeled-data settings and applies to both general-domain benchmarks and specialized downstream tasks. It supports two operating modes: Manual mode, for interactive segmentation with both text and spatial prompts, and Semi-Automatic text-only mode, for applications that require concept-specific segmentation using only textual input. We show that robustness depends on aligning training with the type of prompts used at inference, making train-test prompt consistency an important design principle. Through extensive experiments and ablations, we evaluate our method against SAM+PEFT baselines without semantic conditioning, vision-language + SAM pipelines, SAM 3, and strong semi-supervised segmentation methods that rely on large amounts of unlabeled data. Across these settings, CLIP-Guided SAM consistently achieves superior or competitive performance while remaining parameter-efficient in both training and deployment.