Passive acoustic monitoring holds great promise for ecological inference, yet existing automated tools are typically narrowly trained and non-transferable. We address these limitations with PULSE, a semi-supervised, multi-task framework for Orthoptera bioacoustics, combining weakly-supervised species classification, self-supervised learning on unlabelled field audio, and knowledge distillation from a general-purpose bioacoustic model. Our domain-adapted specialist model outperforms a state-of-the-art general model across all metrics (macro F1: 0.21 vs. 0.07; AUC: 0.74 vs. 0.45; AP: 0.32 vs. 0.19), with active learning further raising F1 to 0.34 and AUC to 0.84. Beyond classification, the learned embeddings encode ecologically meaningful structure, exposed through an interactive visualisation tool for ecological discovery.
Passive Acoustic Monitoring (PAM) is an efficient and non-invasive method for surveying ecosystems at a reduced cost. Typically, autonomous recorders allow the acquisition of vast bioacoustic datasets which are then analyzed. However, power consumption and data storage are both scarce and limit the duration of acquisition campaigns. To address this issue, we propose a smart PAM system which allows the in-situ analysis of the soundscape by embedding a classifier directly onto an AudioMoth microcontroller. Specifically, we propose an optimized yet simple 1D Convolutional Neural Network (1D-CNN) to classify the raw audio. The model focuses on the specific call of Scopoli Shearwater seabirds (endangered species) and is trained on a real-world dataset with a classification accuracy of 91% (balanced accuracy of 89%). We also propose a process to optimize the model to fit the severe resource constraints of the AudioMoth, achieving a ~10kB RAM memory footprint and 20ms inference time. Finally, we present an open-source tutorial of our model optimization and export strategy which can be used for embedding models beyond the scope of our study. Our modified version of the AudioMoth firmware adds two functions: (F1) which selectively records data when the target species has been detected and (F2) which logs the continuous classification results in real time. This work intends to facilitate the conception of intelligent sensors, enhancing the efficiency and scalability of bioacoustic monitoring campaigns.
Louis Lerbourg, Paul Peyret, Juliette Linossier +1
Passive acoustic monitoring is an important tool for biodiversity assessment and wildlife conservation because it supports continuous and non-invasive monitoring of species across large spatial and temporal scales. Robust monitoring remains challenging because many datasets contain sparse positive labels, where species presences may be confirmed while unannotated species cannot be assumed absent. In this work, we study transfer learning under sparse positive labels using BirdCLEF+ 2026 as a target benchmark and BirdCLEF 2021, iNatSounds, WABAD, and BirdSet as external bioacoustic sources. We introduce a multi-source reliability framework that models heterogeneous bioacoustic datasets as distinct supervision sources with differing reliability. Our approach achieves 0.584 macro average precision and 0.860 macro AUC on public BirdCLEF+ 2026 validation labels while outperforming naive source pooling strategies. The strongest gains arise from passive acoustic monitoring datasets and biologically informed source selection. Our findings suggest that transfer learning in bioacoustics is fundamentally a weak supervision and negative transfer problem.
Passive acoustic monitoring produces far more bat recordings than experts can label. We show that simple model-generated pseudo-labels turn this surplus into effective supervision. We compare pseudo-labeling with other semi-supervised learning methods on an 18-species European corpus using only 10% of its training labels, then transfer the strongest approaches to South African field audio containing nine bat taxa and a nuisance class. Pseudo-labeling outperforms the other semi-supervised learning methods on every European measure, recovering up to 61.5% of the gap to full supervision. It transfers to field audio with gains of 10.69 points in species accuracy and 4.96 points in species macro-F1. We also introduce genus-aware smoothing, which directs uncertain target mass toward congeneric species. Combined with uniform smoothing, it reaches 79.16 species macro-F1, 4.73 points above hard targets. Simple pseudo-labels are therefore highly effective at this ecological data scale, while genus-aware targets inject useful biological structure at no annotation cost. https://code4conservation.github.io/UnlabeledEchoes/