In many domains, practitioners seek models that produce accurate forecasts while faithfully capturing latent system dynamics. Existing approaches typically sacrifice one of these goals: deep state space models often assume Gaussian latent transitions, limiting fit and forecasting, while diffusion models are highly expressive but lack principled inference for the underlying dynamics. To combine the strengths of both, we introduce the Diffusion-Driven State Space Model (DDSSM), which replaces the conventional Gaussian transition distribution with a diffusion model. Our DDSSM resolves the open problem of how to jointly train an autoencoder and a diffusion model on sequential data, thereby extending the literature on latent diffusion models for time series. Moreover, we find that the DDSSM empirically outperforms a state-of-the-art deep SSM at fitting and forecasting a simulated time series with multimodal transitions.
Latent state space systems are ubiquitous in statistical modelling, arising naturally when time series are observed through noisy measurements. However, training deep state space models (DSSMs) at scale remains difficult. Two largely distinct strategies have emerged for training DSSMs. The first, auto-encoding DSSMs, trains generative models by optimising a variational lower bound. The second backpropagates through the outputs of classical sequential Monte Carlo (SMC) algorithms. Such approaches can train DSSMs for both discriminative and generative tasks, but their inherently sequential forward passes scale poorly on modern hardware. We propose \emph{parallel variational Monte Carlo} (PVMC), a new training method that bridges these paradigms and robustly trains DSSMs for both discriminative and generative tasks. Across a set of benchmark experiments, PVMC matches or exceeds state-of-the-art performance while training 10× faster than the fastest competing SMC-based approach.
Time series driven by unobserved latent states frequently exhibit abrupt jump discontinuities whose timing and magnitude cannot be predicted from observed history alone. Classical jump-diffusion models offer a principled mathematical framework but assume rigid parametric forms, while recent neural jump models operate on fully observed trajectories without inferring the hidden states that govern the dynamics. We propose \textit{Deep ZakaiJ}, a latent-state model for partially observed jump-diffusion systems that embeds the Zakai nonlinear filtering equation into a neural encoder--decoder architecture. The encoder recursively updates a belief over the latent state via Strang splitting into three interpretable substeps: prior propagation, diffusion innovation, and jump innovation, yielding a differentiable, first-order-accurate approximation of the exact filtering evolution. The decoder is a structured jump-diffusion model explicitly conditioned on the filtered belief, preserving the separation between continuous dynamics and discontinuous shocks. On synthetic, financial, and oceanographic datasets, \textit{Deep ZakaiJ} improves distributional forecasts while remaining competitive in point accuracy, achieving calibrated predictive intervals and recovering interpretable latent structure in synthetic and qualitative case studies.
State Space Models (SSMs) have emerged as a powerful paradigm for efficient long-sequence modeling, offering parallel training and fast linear-time recurrent inference. However, like other recurrent architectures, SSMs must compress an unbounded history into a fixed-size state, which limits context retention and makes precise retrieval over long-range context inherently difficult. To overcome this limitation, we propose Delay State Space Models (DSSMs), a delay differential equation (DDE)-inspired extension of diagonal SSMs that augments discrete SSM recurrences with explicit delayed-state feedback. Making explicit delayed feedback practical requires new stability parameterization, history management, and FFT-training tools. We address these challenges with a practical discretization and parameterization grounded in a simple delay-independent stability condition. To bypass direct time-domain kernel construction, we derive the DSSM transfer function and compute kernels in the frequency domain, using a kernel contour shift to suppress aliasing and recover accurate FFT training. Empirically, DSSMs substantially improve targeted delayed-retrieval tasks while outperforming S4D on most standard sequence metrics and remaining close on the others.