EcoVision: AI-Powered Drone Imaging for Salt Marsh Vegetation Monitoring and Dominance Mapping
Authors: Innocent Onyenonachi, Peter J. Lawerance, Nadia Kanwal
Organizations: School of Computer Science and Mathematics, Keele University, ST5 3BG, United Kingdom · School of Life Science, Keele University, ST5 3BG, United Kingdom
High-resolution RGB imagery acquired from low-altitude UAV surveys was processed through a modular pipeline incorporating transformer-based semantic segmentation, connected-component vegetation extraction, fine-grained species classification using a ConvNeXt architecture, and grid-based dominance scoring at 2x2m resolution. The framework targeted two ecologically significant halophytic grasses, Spartina maritima and Puccinellia maritima, and was trained using a curated and manually annotated UAV imagery, along with biodiversity imagery sourced from publicly accessible datasets. In order to identify these plants from the imagery, our segmentation yielded reliable species masks (mean IoU = 0.56; pixel-level accuracy = 0.96), while object-level classification achieved very good discrimination (F1 = 0.99). Dominance estimates closely matched quadrat-based field surveys, with mean absolute differences below 8%, preserving fine-scale spatial structure under realistic survey conditions. The developed system, named EcoVision, establishes a practical foundation for scalable, high-resolution salt marsh monitoring, demonstrating how AI-driven workflows can translate pixel-level predictions into ecologically interpretable metrics.
Accurate classification of tropical tree species from unoccupied aerial vehicle (UAV) imagery remains challenging due to high species diversity and strong visual similarity among species at typical image resolutions (centimeters per pixel). In contrast, models trained on close-up citizen science photographs captured with smartphones achieve strong plant species classification performance. Recent advances in UAV data acquisition now enable the collection of close-up images that are spatially registered with top-view aerial imagery and approach the level of visual detail found in smartphone photographs, with the trade-off that such high-resolution photos cannot be acquired for many trees. In this work, we evaluate the performance of existing methods using paired top-view and close-up UAV imagery collected in a species-rich tropical forest. Through fine-tuning experiments, we quantify the performance gap between vision foundation models and in-domain generalist plant recognition models across both image types (high-resolution close-up versus coarser-resolution top-view imagery). We show that classification performance is consistently higher on close-up images than on top-view aerial imagery, and that this performance gap widens for rare species. Finally, we propose that self-supervised representation alignment across these two spatial scales offers a promising approach for integrating fine-grained visual information into canopy-level species classification models based on top-view UAV imagery. Leveraging high-resolution close-up UAV imagery to enhance canopy-level species classification could substantially improve large-scale monitoring of tropical forest biodiversity.
Sulagna Saha, Arthur Ouaknine, Etienne Laliberté +7
Coastal algal bloom monitoring requires frequent, spatially detailed, and globally consistent observations, provided by Landsat-8/9 and Sentinel-2 A/B/C. Together, these missions offer over a decade of medium-resolution multispectral imagery with near-global coverage every 2-3 days, enabling the detection of fragmented bloom structures not resolvable by coarse ocean-color sensors. However, their use in aquatic environments remains challenging due to limited spectral coverage and a lack of harmonized reflectance products. As an alternative to traditional bio-optical methods, deep learning-based image classification offers a data-driven approach that can overcome many of these limitations. This study presents the first successful implementation of vision transformer-based coastal algal bloom mapping using 30-m Landsat-Sentinel-2 images. A globally distributed bloom patch dataset was generated across bloom-prone coastal hotspots worldwide. Four transformer-based architectures were compared against a standard convolutional baseline for fine-scale bloom detection, and assessed under different optical water types and atmospheric and surface conditions. All deep learning models showed strong capabilities in detecting floating bloom areas, with omission and commission errors of 8-65%. Under cloud and glint stress in a time series, the Swin Transformer outperformed traditional spectral-index approaches, which produced widespread false positives, effectively avoiding cloud- and glint-affected pixels. Comparisons with MODIS-derived products further highlighted the benefits of higher spatial resolution in detecting fragmented and irregularly affected blooms. Our findings support deep learning as a reliable tool for medium-resolution, consistent monitoring of floating algal blooms in dynamic coastal environments.
This paper presents SWNet, a bimodal end-to-end cross-spectral network specifically engineered for the detection of camouflaged weeds in dense agricultural environments. Plant camouflage, characterized by homochromatic blending where invasive species mimic the phenotypic traits of primary crops, poses a significant challenge for traditional computer vision systems. To overcome these limitations, SWNet utilizes a Pyramid Vision Transformer v2 backbone to capture long-range dependencies and a Bimodal Gated Fusion Module to dynamically integrate Visible and Near-Infrared information. By leveraging the physiological differences in chlorophyll reflectance captured in the NIR spectrum, the proposed architecture effectively discriminates targets that are otherwise indistinguishable in the visible range. Furthermore, an Edge-Aware Refinement module is employed to produce sharper object boundaries and reduce structural ambiguity. Experimental results on the Weeds-Banana dataset indicate that SWNet outperforms ten state-of-the-art methods. The study demonstrates that the integration of cross-spectral data and boundary-guided refinement is essential for high segmentation accuracy in complex crop canopies. The code is available on GitHub: https://cod-espol.github.io/SWNet/