MedFG-VQA: Low-Frequency Memory and Graph Attention for Lightweight Medical VQA
Organizations: School of Computer Science and Engineering, Nanjing University of Science and Technology · State Key Laboratory of Intelligent Manufacturing of Advanced Construction Machinery · Department of Electrical and Computer Engineering, Sungkyunkwan University · School of Computer Science and Engineering, University of Electronic Science and Technology of China
Abstract
Medical Visual Question Answering (Med-VQA) holds significant promise for clinical decision support, yet faces challenges due to limited annotated data and the high computational demands of existing large vision-language models. We propose MedFG-VQA, a lightweight framework that leverages a memory bank to augment DCT-based low-frequency features and employs graph-enhanced cross-attention for effective visual-textual alignment. Specifically, our approach features two key components: Frequency-Memory Fusion (FMF), which enhances low-frequency features by retrieving from a learnable memory bank built on DCT decomposition, and Graph-Aware Cross-Attention (GACA), which aligns visual-textual features via cross-attention and refines them through graph-convolutional aggregation. To address data scarcity, we construct SynMed-VQA, a large-scale synthetic dataset comprising over 2 million question-answer pairs across 9 imaging modalities and 10 major organs, generated with GPT-4o. Extensive experiments on SynMed-VQA and three other standard biomedical VQA benchmarks demonstrate that MedFG-VQA achieves competitive or superior performance compared to much larger models while maintaining significantly lower computational costs, highlighting its efficiency and potential for clinical deployment.
Figures & tables
| Dataset | Images (train val test) | Questions (train val test) |
| CHMNIST [ 18 ] | 2496 1000 1504 | 12480 5000 7520 |
| RETINA [ 20 ] | 2108 841 1268 | 10540 4205 6340 |
| BTMRI [ 33 ] | 2854 1141 1717 | 14270 5705 8585 |
| DermaMNIST [ 40 ] | 7006 1003 2005 | 35030 5015 10025 |
| BUSI [ 3 ] | 389 155 236 | 1945 775 1180 |
| OCTMNIST [ 19 ] | 97476 10832 1000 | 487380 54160 5000 |
| Method | Params | OCTMNIST | CHMNIST | LungColon | CTKidney | COVID-19 | BTMRI | KneeXray | RETINA | Kvasir | DermaMNIST | BUSI | Average |
| InternVL3.5 [ 42 ] | 1B | 0.538 | 0.4569 | 0.4802 | 0.4714 | 0.4943 | 0.4261 | 0.5147 | 0.4355 | 0.4588 | 0.5662 | 0.433 | 0.4846 |
| MiniCPM-V 4.0 [ 44 ] | 4B | 0.5374 | 0.4964 | 0.4987 | 0.52 | 0.503 | 0.4425 | 0.4838 | 0.4276 | 0.4503 | 0.5288 | 0.5033 | 0.4964 |
| Qwen3-VL [ 43 ] | 4B | 0.5872 | 0.5334 | 0.5473 | 0.5547 | 0.5601 | 0.4869 | 0.5647 | 0.4877 | 0.5083 | 0.6076 | 0.5559 | 0.5492 |
| Gemma3 [ 39 ] | 4B | 0.5208 | 0.4537 | 0.4474 | 0.4927 | 0.4751 | 0.4162 | 0.4739 | 0.4202 | 0.4142 | 0.4387 | 0.4483 | 0.4590 |
| LLaVA-Med [ 24 ] | 7B | 0.4834 | 0.4961 | 0.5395 | 0.3991 | 0.3165 | 0.4096 | 0.5272 | 0.4719 | 0.3703 | 0.5788 | 0.4720 | 0.4834 |
| Ours | 795M | 0.7056 | 0.5372 | 0.6493 | 0.6239 | 0.6733 | 0.6155 | 0.6609 | 0.5372 | 0.5440 | 0.7225 | 0.6284 | 0.6441 |
| Model | Params | SLAKE [ 27 ] | VQA-RAD [ 23 ] | PathVQA [ 15 ] | |||||
| Vision | LLM | Total | Closed | Open | Closed | Open | Closed | Open | |
| InternVL3.5 [ 42 ] | 0.3B | 0.8B | 1.1B | 0.6459 | 0.8156 | 0.6140 | 0.6180 | 0.5694 | 0.3187 |
| MiniCPM-V 4.0 [ 44 ] | 0.4B | 3.0B | 4.1B | 0.4246 | 0.8315 | 0.7353 | 0.7978 | 0.6376 | 0.4513 |
| Qwen3-VL [ 43 ] | 0.4B | 4.0B | 4.4B | 0.5120 | 0.9006 | 0.7868 | 0.8764 | 0.6679 | 0.5249 |
| Gemma3 [ 39 ] | 0.4B | 0.6B | 3.2B | 0.5287 | 0.7337 | 0.6507 | 0.8090 | 0.8410 | 0.4608 |
| LLaVA-Med [ 24 ] | 0.3B | 7.2B | 7.5B | 0.6567 | 0.1232 | 0.6434 | 0.0730 | 0.7308 | 0.2828 |
Medical VQA
Medical visual question answering studies how AI systems answer clinical questions using medical images and related patient or report data.
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