Wrong Prediction, Right Answer: Recovering Evidence from Collapsed LLM Sequence Scores
Authors: Qiyao Yan, Chenpeng Wang, Liangming Pan
Organizations: State Key Laboratory of Multimedia Information Processing, Peking University · School of Computer Science, Peking University · YiXin-AILab, YIXIN, Beijing, China · Beijing Academy of Artificial Intelligence, Beijing, China
When a large language model fails a reasoning task, it is often assumed to lack the underlying capability. However, this conflates a genuine absence of reasoning with a late-stage output bottleneck. We observe a consistent readout gap across diverse reasoning benchmarks: hidden-state probes successfully decode correct answers even when native sequence scoring completely collapses due to structural biases. To test whether instance-specific logic survives this collapse, we introduce a diagnostic protocol using a minimal, target-label-free additive correction. Fitting just two parameters on as few as 25 unlabeled examples recovers 9--34 accuracy points for Qwen3.5 models, transferring successfully to OLMo-2-1B and Llama-3.1-8B. Crucially, these recovered decisions persist on hard instances unresolved by simple lexical overlap and significantly exceed count-preserving permutation baselines. Our results show that many apparent zero-shot reasoning deficits are expression failures masking intact internal logic, urging a narrower interpretation of benchmark evaluations.
Large language models (LLMs) have become increasingly used for various tasks, often coupled with Chain-of-Thought (CoT) prompting to boost accuracy. Recent work has shown that high label-prediction accuracy does not guarantee correct intermediate reasoning, and the causes of reasoning flaws vary from sample to sample, yet existing remedies either focus on a single domain or assume that one flaw type applies uniformly across samples. A simple mitigation method is to provide the model with the correct answer, but we show that this yields no consistent improvement in reasoning quality. This indicates that the problem cannot be fixed by LLMs' awareness of answers, and must instead be addressed through the structure of reasoning. Motivated by this, we propose CRAFT (Consensus Reasoning-knowledge-graph Aggregation for Flaw-aware Trace synthesis), which aggregates the consensus components shared across multiple candidate reasoning traces to synthesize improved ones. CRAFT consistently improves label-prediction accuracy on both logical and mathematical reasoning benchmarks, outperforming most baselines, while its post-processed traces achieve higher quality under fine-grained benchmark evaluation.
Should we trust Large Language Models (LLMs) with high accuracy? LLMs achieve high accuracy on reasoning benchmarks, but correctness alone does not reveal the quality of the reasoning used to produce it. This highlights a fundamental limitation of outcome-based evaluation: models may arrive at correct answers through flawed reasoning, and models with substantially different reasoning capabilities can nevertheless exhibit similar benchmark accuracy, for example due to memorization or over-optimization. In this paper, we ask: given existing benchmarks, can we move beyond outcome-based evaluation to assess the quality of reasoning itself? We seek metrics that (1) differentiate models with similar accuracy and (2) are robust to variations in input prompts and generation configurations. To this end, we propose a reasoning score that evaluates reasoning traces along dimensions such as faithfulness, coherence, utility, and factuality. A remaining question is how to aggregate this score across multiple sampled traces. Naively averaging them is undesirable, particularly in long-horizon settings, where the number of possible trajectories grows rapidly, and low-confidence correct traces are more likely to be coincidental. To address this, we introduce the Filtered Reasoning Score (FRS), which computes reasoning quality using only the top-K% most confident traces. Evaluating with FRS, models that are indistinguishable under standard accuracy exhibit significant differences in reasoning quality. Moreover, models with higher FRS on one benchmark tend to perform better on other reasoning benchmarks, in both accuracy and reasoning quality. Together, these findings suggest that FRS complements accuracy by capturing a model's transferable reasoning capabilities. We open source our evaluation codebase: https://github.com/Manas2006/benchmark_reproducibility.
A standard recipe for distilling the reasoning ability of large language models (LLMs) is to sample chains of thought from the model, keep those that reach the correct final answer, and fine-tune on the survivors. When sampling fails, a common fix shows the generator the gold answer and asks it to write a chain that reaches that answer. We show that this second step degrades the training data in a way that correctness filtering cannot catch. We run a controlled experiment that fixes the generator, the problem set, and the correctness filter, and varies only whether the chain is generated under answer-conditioning, the gold answer shown with a request to reach it. Training a strong instruction-tuned reasoning model on its own answer-conditioned chains sharply lowers its verifiable-reasoning accuracy. The loss grows with difficulty, reaching as much as about 27 points on the hardest competition problems. The mechanism is legible in the chains themselves, which rationalize backward from the shown answer instead of deriving it, with the early final-answer statement as the measurable symptom. The harm is a property of the data rather than the generator, read off unlabeled generations before any fine-tuning, ordering the penalty across eight thinking models from four families, and transferring across teacher families. A prompt ablation localizes it to the rationalize-toward instruction rather than the answer's bare visibility. The practical takeaway is to generate answer-blind, because no correctness filter can see this damage in the data.