Fed-ADApt: Federated Anytime Depth Adaptation for Resource-Aware Medical Image Segmentation
Authors: Abhijeet Parida, Zhifan Jiang, Pooneh Roshanitabrizi, Austin Tapp, Maria J. Ledesma-Carbayo, Syed Muhammad Anwar, Ziyue Xu, Marius George Linguraru, +1 more
Organizations: Sheikh Zayed Institute for Pediatric Surgical Innovation, Children’s National Hospital, Washington, DC, United States · Escuela Técnica Superior de Ingenieros de Telecomunicación, Universidad Politécnica de Madrid, Madrid, Spain · CIBER-BBN, Instituto de Salud Carlos III, Madrid, Spain · Departments of Radiology and Pediatrics, The George Washington University, Washington, DC, United States · NVIDIA Corporation, Santa Clara, CA, United States
Federated learning (FL) enables collaborative training of medical image segmentation models without sharing raw patient data, yet existing approaches assume a homogeneous compute budget across institutions, limiting participation of low-resource sites. We propose Fed-ADApt, a depth-adaptive federated framework for UNet-based segmentation that jointly addresses low-compute training and inference. Fed-ADApt integrates multi-depth supervision with hierarchical depth-wise aggregation, allowing each site to train according to its local compute budget while contributing to a global model that supports dynamic depth selection at deployment. We evaluated Fed-ADApt on multi-site 2D retinal fundus disc segmentation and 3D brain tumor segmentation. Across both tasks, federated collaboration substantially improves robustness under domain shift. Fed-ADApt matched the full-resource FedAvg performance in 3D and achieved competitive 2D performance with a 4.7% average Dice reduction, while reducing average inference cost by 19.5% in 3D and 34.5% in 2D and substantially reducing training cost by 98% at the most constrained sites. Importantly, Fed-ADApt enables low-resource institutions that cannot train full-capacity models to participate in federations while maintaining competitive global performance under a favorable accuracy to efficiency trade-off. By considering training and inference compute budgets, Fed-ADApt provides a practical and equitable solution for federated medical image segmentation across heterogeneous clinical and edge-enabled imaging environments.
Figures & tables
Fig. 1: Fed-ADApt for resource-aware federated segmentation. (a) The proposed multi-depth UNet produces full-resolution predictions from multiple encoder depths, enabling different compute paths within a single architecture. (b) DepthFL supports heterogeneous training by allowing clients to train depth-restricted models, but all clients perform full-depth inference. (c) Federated anytime supports adaptive inference by training all depths at every client, but requires full-model training at all sites. (d) Fed-ADApt jointly addresses both constraints by allowing each client to train only the depths permitted by its compute budget while retaining dynamic depth selection at inference.
Retina Disc Segmentation (2D)
Brain Tumor Segmentation (3D) [ 3 ]
Site A
Site B
Site C
Site D
Site E
Site P
Site Q
Site R
Site S
Site T
Drishti [ 23 ]
BinRushed4 [ 1 ]
Magrabia [ 1 ]
Messidor [ 1 ]
REFUGE [ 20 ]
UCSF
Duke
UCSD
Missouri
Indiana
Cstrain
1
2
1
4
5
5
4
3
3
1
Train
50
98
47
230
400
357
284
120
192
18
Val
25
49
24
115
200
119
95
40
64
6
Test
25
49
23
115
200
120
95
40
64
7
TABLE I: Multi-site datasets and simulated compute budgets. Summary of the 2D retinal fundus and 3D brain tumor segmentation datasets used for federated evaluation. Each site is assigned a normalized compute budget Cstrain∈1,…,5 , where lower values represent resource-constrained clients and Cstrain=5 denotes full-capacity training.
Segmentation
Training
Inference
Comm.
Method
(Dice)
GMAC / VRAM(GB)
GMAC / VRAM(GB)
Cost
Site A
Site B
Site C
Site D
Site E
Avg
Max
Min
Avg
Max
Min
Avg
Local Model
0.27 ± 0.11
0.70 ± 0.18
0.20 ± 0.08
0.80 ± 0.06
0.87 ± 0.13
0.55 ±0.11 ∗
16.5 / 0.04
0.7 / 0.03
6.6 / 0.03
5.5 / 0.04
0.2 / 0.02
2.2 / 0.02
-
High Resource Model
0.41 ± 0.26
0.06 ± 0.03
0.21 ± 0.13
0.07 ± 0.04
0.87 ± 0.13
0.32 ± 0.12 ∗
16.5 / 0.04
0.0 / 0.00
3.3 / 0.01
5.5 / 0.04
5.5 / 0.04
5.5 / 0.04
-
FedAvg
0.90 ± 0.10
0.80 ± 0.17
0.91 ± 0.05
0.80 ± 0.13
0.82 ± 0.14
0.85 ± 0.12 ∗
16.5 / 0.04
16.5 / 0.04
16.5 / 0.04
5.5 / 0.04
5.5 / 0.04
5.5 / 0.04
100%
Federated Anytime
0.88 ± 0.13
0.75 ± 0.15
0.88 ± 0.16
0.86 ± 0.08
0.83 ± 0.15
0.84 ± 0.13 ∗
33.9 / 0.12
33.9 / 0.12
33.9 / 0.12
5.5 / 0.04
2.5 / 0.03
3.9 / 0.04
100%
TABLE II: 2D retinal disc segmentation. Dice scores and compute cost for various FL methods under compute constraints. GMAC was calculated for a batch size of 10. ∗ indicates statistical significance ( p<0.05 ) in Dice compared to Fed-ADApt . Training strategy: % No FL; % full-capacity FL; % compute-aware FL.
Segmentation
Training
Inference
Comm.
Method
(Dice)
GMAC / VRAM(GB)
GMAC / VRAM(GB)
Cost
Site P
Site Q
Site R
Site S
Site T
Avg
Max
Min
Avg
Max
Min
Avg
ET
0.81 ± 0.13
0.85 ± 0.12
0.71 ± 0.22
0.74 ± 0.23
0.33 ± 0.14
0.69 ± 0.17
Local Model
TC
0.83 ± 0.12
0.87 ± 0.10
0.74 ± 0.22
0.77 ± 0.21
0.50 ± 0.20
0.74 ± 0.17
477 / 0.99
133 / 0.80
357 / 0.94
159 / 0.97
44 / 0.79
119 / 0.93
-
WT
0.83 ± 0.12
0.88 ± 0.11
0.75 ± 0.22
0.77 ± 0.22
0.10 ± 0.04
0.66 ± 0.16 ∗
ET
0.81 ± 0.13
0.73 ± 0.22
0.68 ± 0.24
0.56 ± 0.29
0.74 ± 0.14
0.71 ± 0.20
TABLE III: 3D brain tumor segmentation. Dice scores for enhancing tumor (ET), tumor core (TC), and whole tumor (WT) for various FL methods. GMAC was calculated for a batch size of 10. ∗ indicates statistical significance ( p<0.05 ) in WT Dice compared to Fed-ADApt . Training strategy: % No FL; % full-capacity FL; % compute-aware FL.
Fig. 2: Qualitative effect of depth-adaptive inference. Retinal fundus predictions from Fed-ADApt at increasing depth levels. Shallower prediction paths provide coarse optic disc localization with lower computation, while deeper paths progressively refine the segmentation boundary and better align with the expert annotation. Green contours indicate predictions and blue contours indicate ground truth.
Low budget
Medium budget
High budget
Cstrain
Dice
Cstrain
Dice
Cstrain
Dice
Site A
1
0.86
3
0.86
4
0.91
Site B
2
0.68
3
0.78
5
0.73
Site C
1
0.86
1
0.87
1
0.89
Site D
4
0.75
4
0.78
4
0.81
Site E
5
0.86
5
0.84
5
0.85
TABLE IV: Sensitivity of Fed-ADApt to federation compute budget. Site-level Cstrain and Dice scores are shown for low-, medium-, and high-budget federations. Increasing the federation budget improves mean Dice.
Purpose: Developing generalizable medical image segmentation models is challenging because imaging data are distributed across institutions and differ in modality and acquisition protocol. Federated learning (FL) enables collaborative training without centralizing raw medical images, but cross-modality domain shifts between computed tomography (CT) and magnetic resonance imaging (MRI) can substantially reduce model performance. This study investigates augmentation-driven cross-modality FL for abdominal organ and whole-heart segmentation. Methods: We evaluate convolution-based spatial augmentation, frequency-domain argumentation, domain-specific normalization, and global intensity nonlinear (GIN) augmentation for multimodal segmentation. Abdominal organ segmentation and whole-heart segmentation are first evaluated using a 2D U-Net framework. For whole-heart segmentation, we additionally perform native 3D experiments using a self-configuring nnU-Net architecture on the CARE-WHS 2026 dataset, enabling evaluation of whether the observed cross-modality FL behavior persists when moving from slice-based 2D segmentation to volumetric 3D segmentation. Results: GIN provides the most consistent cross-modality performance among the evaluated approaches in the original 2D experiments. For pancreas segmentation, the Dice similarity coefficient (DSC) improved from 0.073 to 0.437 when CT data were incorporated through federated cross-modality training. In 3D whole-heart segmentation, FedGIN improved mean DSC over FedAvg from 0.8696 to 0.8901 on the unseen CT center and from 0.7160 to 0.7956 on the unseen MRI center. Relative to centralized GIN training, FedGIN retained 92.4% of performance on unseen CT data and achieved comparable performance on unseen MRI data (0.7956 versus 0.7937).
Department of Circulation and Medical Imaging, Norwegian University of Science and Technology, Trondheim, Norway. · Central Staff, St. Olavs Hospital, Trondheim University Hospital, Trondheim, Norway.
Low-Rank Adaptation (LoRA) enables efficient federated fine-tuning of segmentation foundation models for medical imaging. However, most federated LoRA methods adopt a uniform aggregation rule, which breaks under the encoder-decoder asymmetry in medical segmentation: the encoder is dominated by appearance shifts, while the decoder is dominated by supervision variations. This mismatch entangles shared anatomy with site-specific biases and harms generalization. To address this, we propose Inverse Asymmetric Tuning (IAT). IAT aligns adaptation with heterogeneity sources by personalizing module-specific components in the encoder to absorb appearance shifts and in the decoder to accommodate site-dependent supervision, while retaining a shared pathway for transferable consensus. However, structural separation alone is insufficient under LoRA's bilinear parameterization, where multiplicative coupling can still cause site-specific updates to leak into the shared direction. We therefore introduce a Subspace Orthogonality Regularizer that penalizes shared-local collinearity in the effective update space, mitigating leakage without extra communication. Experiments show consistent improvements over strong federated LoRA and parameter-efficient FL baselines.
Xingyue Zhao, Wenke Huang, Linghao Zhuang +7
Department of Neurosurgery, Peking Union Medical College Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College · The Key Laboratory of Cognition and Decision Intelligence for Complex Systems, Institute of Automation, Chinese Academy of Sciences · College of Computing and Data Science, Nanyang Technological University, Singapore +4
Federated learning enables hospitals to collaboratively train segmentation models without sharing patient data. However, current evaluation protocols report only average performance across clients, masking failures at individual sites. In clinical deployment, a model that fails consistently at one hospital is a real safety risk that a good mean score can hide entirely. We introduce MedFL-Stress, a controlled stress-testing framework that exposes exactly this failure mode. Using 2D axial slices from BraTS 2020 distributed across four simulated hospital clients, we apply graded MRI appearance shifts (gamma contrast, scale-shift, and noise-plus-blur) reflecting scanner and acquisition variability in real multi-site deployments. Three federated baselines are evaluated: FedAvg, FedProx, and FedBN. Worst-hospital Dice and inter-hospital disparity are treated as primary metrics, not supplementary observations. FedAvg achieves the highest global mean Dice (0.8159) but conceals a 0.0850 gap between its best and worst-performing hospital. FedBN closes that gap by 41% (0.0850 to 0.0503) while sacrificing less than half a Dice point in mean accuracy (0.8159 to 0.8109), and the weakest hospital gains 3.5 Dice points outright (0.7309 to 0.7656). These findings demonstrate that robustness-oriented evaluation protocols are essential for reliable federated medical imaging deployment.