math.NAOct 29, 2026

Fast rigid rotational alignment of voxelized 3-D density maps in sliced Wasserstein distance

Authors: Oscar Mickelin, Yunpeng Shi, Amit Singer, Eric J. Verbeke

Organizations: Yau Mathematical Sciences Center, Tsinghua University, Beijing 100084, China · Department of Mathematics, University of California at Davis, Davis CA, USA · Department of Mathematics, Princeton University, Princeton, NJ, USA · Program in Applied and Computational Mathematics, Princeton University, Princeton, NJ, USA · 

Abstract

We develop a fast method for the rigid alignment of voxelized three-dimensional density functions over SO(3)\mathsf{SO}(3) using sliced optimal transport. Our approach efficiently transforms each density map into a tensor of one-dimensional quantile functions, taken from central slices over the unit sphere, such that the Euclidean distance of the transformed volumes approximates the sliced 2-Wasserstein distance. Our formulation is therefore compatible with existing, fast, voxel-based Euclidean alignment algorithms. We provide theoretical analysis and numerical experiments demonstrating that the sliced 2-Wasserstein distance is a robust metric for comparing three-dimensional shapes and for computing their rigid alignment.

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