Molecular Design
Molecular design leverages computational methods to create molecules with desired properties, accelerating drug discovery and materials science. Current research heavily employs machine learning, particularly generative models like variational autoencoders (VAEs), transformers, and GFlowNets, often integrated with reinforcement learning and Bayesian optimization to navigate the vast chemical space and ensure synthetic feasibility. These advancements enable efficient exploration of synthesizable molecules, optimization of multiple properties simultaneously, and the incorporation of diverse data types, including text descriptions and high-content imaging data, to guide the design process. The resulting improvements in efficiency and accuracy have significant implications for various scientific fields and industrial applications.
Papers
Multi-view deep learning based molecule design and structural optimization accelerates the SARS-CoV-2 inhibitor discovery
Chao Pang, Yu Wang, Yi Jiang, Ruheng Wang, Ran Su, Leyi Wei
Calibration and generalizability of probabilistic models on low-data chemical datasets with DIONYSUS
Gary Tom, Riley J. Hickman, Aniket Zinzuwadia, Afshan Mohajeri, Benjamin Sanchez-Lengeling, Alan Aspuru-Guzik