Porous Media

Carbonate reservoirs offer significant capacity for subsurface carbon storage, oil production, and underground hydrogen storage. X-ray computed tomography (X-ray CT) coupled with numerical simulations is commonly used to investigate the multiphase flow behaviors in carbonate rocks. Carbonates exhibit pore size distribution across scales, hindering the comprehensive investigation with conventional X-ray CT images. Imaging samples at both macro and micro-scales (multi-scale imaging) proved to be a viable option in this context. However, multi-scale imaging faces two key limitations: the trade-off between field of view and voxel size necessitates resource-intensive imaging, while multi-scale multi-physics numerical simulations on resulting digital models incur prohibitive computational costs. To address these challenges, we propose a machine learning-enhanced data assimilation framework that leverages experimental drainage relative permeability measurements to achieve efficient characterization of micro-scale structures, delivering a data-driven solution toward a high-fidelity multiscale digital rock modeling. We train a dense neural network (DNN) as a proxy to a multi-scale pore network simulator and couple it with an ensemble smoother with multiple data assimilation (ESMDA) algorithm. DNN-ESMDA framework simultaneously infers the CO2-brine drainage relative permeability of microporosity phases with associated uncertainty estimation, revealing the relative importance of each rock phase and guiding future characterization. Our DNN-ESMDA framework achieves a computational speedup, reducing inference time from thousands of hours to seconds compared with the usage of conventional multiscale numerical simulation. Given this computational efficiency and applicability, the machine learning-enhanced ESMDA framework presents a generalizable approach for characterizing multiscale carbonate rocks.

X-ray micro-computed tomography (micro-CT) provides non-destructive three-dimensional (3D) imaging of porous material microstructures. In situ experiments, including mechanical loading and reactive transport, increasingly require dynamic four-dimensional (4D) imaging with volumes repeatedly acquired during experiments. However, rapid acquisition typically requires fewer projections, shorter exposures, or reduced fields of view, producing reconstructions with noise, blur, and artifacts that obscure pores, microcracks, and interfaces. To address this challenge, this study introduces InSituRes, a physics-informed same-grid volumetric enhancement framework for fast dynamic X-ray micro-CT imaging of temporally evolving materials. InSituRes maps fast-acquisition volumes to higher-quality long-acquisition reconstructions using paired scans of the same specimens. The model integrates 3D convolutional feature extraction with slice-wise transformer attention to capture local and broader in-plane context. A learnable forward degradation model approximates rapid acquisition effects, including spatial blurring, intensity scaling differences, and signal-dependent noise. During training, reconstructed volumes should match high-quality reference scans and reproduce observed fast acquisition data after propagation through the forward model, imposing a physics-guided consistency constraint. Experiments on unseen micro-CT datasets demonstrate improved reconstruction fidelity and enhanced visibility of fine microstructural features relative to conventional interpolation and learning-based enhancement approaches. The framework supports quantitative interpretation of fast 4D X-ray micro-CT scans of evolving materials.

Quantitative microstructural characterization is fundamental to materials science, and electron micrographs (EMs) provide indispensable high-resolution insights. However, progress in deep learning-based analysis of EMs has been hampered by the scarcity of large-scale, expert-annotated public datasets. To address this issue, we introduce EM3M, a large-scale and multimodal dataset for instance-level understanding of EMs. EM3M comprises 5,091 high-quality EMs, approximately 3 million instance segmentation annotations, and image-level textual descriptions with disentangled attributes. The dataset is constructed through a rigorous multi-stage curation and validation pipeline, with comprehensive statistical analyses to ensure reliability and reproducibility. Building upon these curated image-text pairs, we further provide a text-to-image diffusion model that serves as a controllable data augmentation engine, demonstrating that synthetic augmentation consistently improves downstream segmentation performance. To establish a systematic benchmark, we evaluate representative instance segmentation methods on EM3M. Our results reveal that conventional detection-based and query-based methods struggle with the extreme instance densities and textural complexities inherent in EMs. We additionally provide an optimized flow-based baseline to facilitate fair comparison and future research. EM3M {Dataset: https://huggingface.co/datasets/UniParser/EM3M}, the generative engine {Generation: https://huggingface.co/UniParser/EM3M-Gen}, and an online demo {Segmentation demo: https://www.bohrium.com/apps/uni-aims} are publicly available to support future research in automated materials analysis.