cc-Shapley: Measuring Multivariate Feature Importance Needs Causal Context

Machine learning pipelines commonly flatten relational data into single-table representations, discarding structural constraints. Widely used Shapley value-based feature attributions then rely on feature independence, evaluating the model on combinations that could never arise in the underlying data, producing misleading explanations. We propose RelShap, a framework that incorporates relational constraints and data provenance into Shapley value computation, restricting both background data and coalition evaluation to relationally valid configurations. The framework is estimator-agnostic and composes with Kernel SHAP, Monte Carlo, and Leverage SHAP without altering their sampling or weighting properties. Functional dependencies further induce equivalence classes over feature coalitions, which RelShap exploits to reduce runtime without changing Shapley values; we provide a combinatorial characterization of the expected speedup. Experiments across multiple datasets, models, and estimators show that RelShap produces explanations that are more faithful to the data-generating process, correctly identifying the dominant feature in controlled settings where existing methods, including Conditional SHAP and ManifoldShap, do not. Our code is available at: https://github.com/duneag2/relshap.

We address the problem of explainability in machine learning models through feature attribution methods. In particular, we consider a variant of Shapley values known as Asymmetric Shapley Values (ASV), which enables the incorporation of causal knowledge into model-agnostic explanations through the use of a causal graph. We show that in certain contexts in which the computation of SHAP is $\#P$-hard, the exact computation of ASV can be done in polynomial time. To extend this algorithmic result, we introduce a notion of equivalence classes over the topological orderings of the underlying causal graph, which is useful to reduce the time to compute ASV. In particular, we present a polynomial-time algorithm (in the number of equivalence classes) to compute it whenever the causal graph is a rooted directed tree. Finally, we develop an algorithm for approximating ASV in arbitrary causal DAGs which relies on a procedure to sample topological orderings uniformly at random. To implement this sampling mechanism we leverage known algorithms as well as simpler alternatives. Our experimental results demonstrate the practical viability of the proposed approach in realistic causal structures.

Modern machine-learning models often contain strongly dependent or redundant features, making feature attribution difficult because shared predictive information can be distributed across correlated predictors. Existing methods such as SHAP, LIME, HSIC, MI/CMI, and SAGE may therefore produce unstable rankings under multicollinearity or near-duplicate predictors. We propose the Mutual Correlation Impact Ratio Method (MCIR-M), a dependence-aware global feature-importance approach that quantifies the unique predictive information contributed by each feature beyond a selected dependence neighbourhood. MCIR-M introduces the Mutual Correlation Impact Ratio (MCIR), which conditions each feature on strongly dependent neighbours and computes a normalized ratio of conditional to block-level information. The population score lies in [0,1] and equals zero under exact conditional redundancy. We also introduce a lightweight estimation procedure that computes MCIR using a fraction of the available data and evaluates agreement with full-data explanations. Across controlled synthetic redundancy experiments and the UCI HAR benchmark, MCIR shows dependence-aware ranking behaviour, with its clearest advantage under injected near-duplicate predictors. Comparisons with independent and conditional SHAP, SAGE, HSIC, MI-based scores, and CIR-family baselines are mixed across real-data criteria. Reduced explanation samples lower computational burden in the evaluated configurations, while agreement with full-data explanations is assessed separately through ranking, head-set, and faithfulness diagnostics. Overall, MCIR-M provides a practical dependence-aware diagnostic for global explanation under strong feature dependence.