LUMEN: Longitudinal Multi-Modal Radiology Model for Prognosis and Diagnosis
Authors: Zhifan Jiang, Dong Yang, Vishwesh Nath, Abhijeet Parida, Nishad P. Kulkarni, Ziyue Xu, Daguang Xu, Syed Muhammad Anwar, +2 more
Organizations: Sheikh Zayed Institute for Pediatric Surgical Innovation, Children’s National Hospital, Washington DC, USA · Nvidia Corporation, Santa Clara, CA, USA · ETSI Telecomunicación, Universidad Politécnica de Madrid, Madrid, Spain · School of Medicine and Health Sciences, George Washington University, Washington DC, USA
Large vision-language models (VLMs) have evolved from general-purpose applications to specialized use cases such as in the clinical domain, demonstrating potential for decision support in radiology. One promising application is assisting radiologists in decision-making by the analysis of radiology imaging data such as chest X-rays (CXR) via a visual and natural language question-answering (VQA) interface. When longitudinal imaging is available, radiologists analyze temporal changes, which are essential for accurate diagnosis and prognosis. The manual longitudinal analysis is a time-consuming process, motivating the development of a training framework that can provide prognostic capabilities. We introduce a novel training framework LUMEN, that is optimized for longitudinal CXR interpretation, leveraging multi-image and multi-task instruction fine-tuning to enhance prognostic and diagnostic performance. We conduct experiments on the publicly available MIMIC-CXR and its associated Medical-Diff-VQA datasets. We further formulate and construct a novel instruction-following dataset incorporating longitudinal studies, enabling the development of a prognostic VQA task. Our method demonstrates significant improvements over baseline models in diagnostic VQA tasks, and more importantly, shows promising potential for prognostic capabilities. These results underscore the value of well-designed, instruction-tuned VLMs in enabling more accurate and clinically meaningful radiological interpretation of longitudinal radiological imaging data.
Figures & tables
Figure 1: Qualitative evaluation: conversations provided by NVILA-8B, NVILA-8B-FT (finetuned), and LUMEN.
Model
BLEU-4
ROUGE-L
Llama Score
Test on 1,369 images and 1,369 difference questions
NVILA-8B
0.001 *
0.071 *
2.486 *
NVILA-8B †
0.020 *
0.206 *
3.275 *
LUMEN †
0.375
0.656
4.611
Test on 2,451 images and 3,936 prediction questions
NVILA-8B
0.003 *
0.052 *
2.242 *
Table 1: Prognostic Performance: evaluated on open-ended difference- and prediction-based questions. † = fine-tuned on Medical-Diff-VQA. The asterisks show statistical significance (p <0.001 ) across paired comparisons with LUMEN, using the Wilcoxon signed rank test.
Model
BLEU
ROUGE
Recall
Llama
Test on 3,228 images and 6,683 open-ended questions
LLaVA-Med †
0.604
D-Rax †
0.616
NVILA-8B
0.025 *
0.258
0.674
6.975 *
NVILA-8B †
0.551
0.766
0.689 *
7.933
LUMEN †
0.551
0.766
0.694
7.953
Table 2: Diagnostic Performance: evaluated on questions related to abnormality, disease presence, location, severity level, type, and image view. † = fine-tuned on Medical-Diff-VQA. BLEU-4 and ROUGE-L were used. The asterisks show statistical significance (p <0.05 ) across paired comparisons with LUMEN, using the Wilcoxon signed rank test.
Longitudinal chest X-ray (CXR) interpretation requires reasoning over disease evolution across multiple patient visits, yet most existing medical VQA benchmarks focus on single images or short-horizon image pairs. We introduce MI-CXR, a benchmark for standardized evaluation of Multi-Interval longitudinal reasoning over multi-visit CXR sequences, without requiring free-form report generation or additional clinical context. MI-CXR comprises five-way multiple-choice questions over five-visit patient timelines and instantiates three complementary task families: Temporal Event Localization, Interval-wise Change Reasoning, and Global Trajectory Summarization, which assess clinically grounded visual reasoning over time. Evaluating 14 state-of-the-art vision-language models (VLMs) shows low overall performance, with an average accuracy of 29.3%, only modestly above random guessing. Using stage-wise diagnostic probing, we find that models often produce locally plausible interval descriptions but fail to enforce temporal constraints or compose evidence into globally consistent decisions over the full timeline. These findings reveal key limitations of current VLMs and establish MI-CXR as a principled benchmark for longitudinal medical reasoning. The benchmark is available at https://github.com/AIDASLab/MI-CXR
Sunghwan Steve Cho, Yunseok Han, Jaeyoung Do
AIDAS Laboratory, 1ECE & 2IPAI, Seoul National University
Vision-language models (VLMs) are increasingly proposed for clinical decision support, yet their reliability in real-world scenarios that require integrating both visual and textual context from medical records remains poorly characterized. This paper identifies three failure modes: (1) modality over-reliance on text over images, (2) spurious reliance on irrelevant clinical history, and (3) prompt sensitivity across semantically equivalent inputs. We evaluate a diverse set of general-domain and medically-tuned open and closed VLMs on chest x-ray tasks using MIMIC-CXR. By systematically manipulating image-text alignment, clinical history, and prompt formulations, we found that VLM decisions are dominated by the text modality, even when visual evidence is available. Moreover, we observed that VLMs are heavily influenced by irrelevant reports, while minor prompt changes can reverse correct image-based predictions. Our findings underscore the need for explicit safeguards and stress-testing before considering the use of these models in clinical practice.
David Restrepo, Ira Ktena, Maria Vakalopoulou +2
1MICS, CentraleSup´elec - Universit´e Paris-Saclay, France · 2Cancer Data Science Unit, IHU PRISM, National Institute in Precision Oncology, University Paris-Saclay, CentraleSupelec, Gustave Roussy, INSERM, Gif-sur-Yvette · 3Ellison Institute of Technology (EIT), Oxford, UK +1
Longitudinal information in radiology reports refers to the sequential tracking of findings across multiple examinations over time, which is crucial for monitoring disease progression and guiding clinical decisions. Many recent automated radiology report generation methods are designed to capture longitudinal information; however, validating their performance is challenging. There is no proper tool to consistently label temporal changes in both ground-truth and model-generated texts for meaningful comparisons. Large language models (LLMs) offer a promising annotation alternative, as they are capable of capturing nuanced linguistic patterns and semantic similarities without extensive manual intervention. They also adapt well to new contexts. In this study, we therefore propose an LLM-based pipeline to automatically annotate longitudinal information in radiology reports. The pipeline first identifies sentences containing relevant information and then extracts the progression of diseases. We evaluate and compare five mainstream LLMs on these two tasks using 500 manually annotated reports. Considering both efficiency and performance, Qwen2.5-32B was subsequently selected and used to annotate another 95,169 reports from the public MIMIC-CXR dataset. Our Qwen2.5-32B-annotated dataset provided us with a standardized benchmark for evaluating report generation models. Using this new benchmark, we assessed seven state-of-the-art report generation models. Our LLM-based annotation method outperforms existing annotation solutions, achieving 11.3% and 5.3% higher F1-scores for longitudinal information detection and disease tracking, respectively. The source code is available at https://github.com/wxinyi1996/Standardizing-Longitudinal-Chest-X-ray-Report-Evaluation-via-Large-Language-Model-Annotation.git.
Xinyi Wang, Grazziela Figueredo, Ruizhe Li +1
School of Computer Science, The University of Nottingham, Nottingham, NG7 2RD, United Kingdom. · School of Medicine, The University of Nottingham, Nottingham, NG7 2RD, United Kingdom.