cs.AIApr 9, 2026

Evaluating Counterfactual Explanation Methods on Incomplete Inputs

Authors: Francesco Leofante, Daniel Neider, Mustafa Yalçıner

Organizations: Department of Computing, Imperial College London, UK · TU Dortmund University, Dortmund, Germany · Center for Trustworthy Data Science and Security, University Alliance Ruhr, Dortmund, Germany

Abstract

Existing algorithms for generating Counterfactual Explanations (CXs) for Machine Learning (ML) typically assume fully specified inputs. However, real-world data often contains missing values, and the impact of these incomplete inputs on the performance of existing CX methods remains unexplored. To address this gap, we systematically evaluate recent CX generation methods on their ability to provide valid and plausible counterfactuals when inputs are incomplete. As part of this investigation, we hypothesize that robust CX generation methods will be better suited to address the challenge of providing valid and plausible counterfactuals when inputs are incomplete. Our findings reveal that while robust CX methods achieve higher validity than non-robust ones, all methods struggle to find valid counterfactuals. These results motivate the need for new CX methods capable of handling incomplete inputs.

Figures & tables

Explore similar work

Sep 16, 2026

FCx: An algorithm for finding Feasible Counterfactual Explanations

Counterfactual (CF) explanations identify changes that alter an input's classification. While existing methods produce realistic and low-cost CFs, they often fail to ensure feasibility, by suggesting non-constructive modifications or incompatible with future changes (e.g., changing an individual's race to secure a job offer). We introduce a refinement of CF explanations that explicitly enforces feasibility. Our approach is the first to efficiently generate CFs that are realistic, low-cost and feasible. We accommodate both hard feasible constraints, specified by domain knowledge users, and soft feasible constraints, inferred automatically via causal inference from the dataset. Our method, Feasible Counterfactual Explanations (FCx), is based on a modified Variational Autoencoder (VAE) optimized with a multi-factor loss function. We measure the cost of a change based on the absolute change in values (proximity) as well as the number of features changed (sparsity) while realism is measured based on the LOF for density estimation, guaranteeing that CFs reside in densely populated regions. Extensive experiments on four public datasets show that our approach matches state-of-the-art performance across multiple metrics while guaranteeing feasibility.
Jul 24, 2026

CEL: Comprehensive Counterfactual Explanations Library and Benchmark

Counterfactual explanations are a prominent approach in explainable artificial intelligence (xAI), providing actionable guidance on what input changes would alter a model's prediction to a desired outcome. While early methods primarily focused on minimal feature changes, recent work incorporates additional properties such as sparsity, actionability and plausibility. Despite this progress, fair and systematic evaluation remains challenging. Existing studies often rely on different data splits, predictive models, and evaluation metrics, which limits objective comparison across methods. To fill this gap, we introduce CEL (Counterfactual Explanations Library), a unified library and benchmark for counterfactual explanations designed to support consistent implementation and evaluation. CEL includes 18 datasets of varying size and complexity and provides implementations or reimplementations of 14 widely used counterfactual methods. Using this standardized setup, we conduct a comprehensive quantitative comparison across a variety of methods on datasets that differ in size, number, and types of attributes. The evaluation protocol incorporates multiple complementary metrics capturing validity, coverage, sparsity, proximity, and distributional plausibility, including density- and outlier-based measures to assess the realism of generated counterfactuals. To the best of our knowledge, this is the first comprehensive benchmark that systematically evaluates recent counterfactual explanation methods within a unified and reproducible framework. While prior libraries and benchmarking efforts exist in the literature, many are outdated, limited in scope, or lack consistent evaluation protocols. The proposed benchmark aims to improve reproducibility, enable fair comparison, and establish a workbench for the development of future counterfactual explanation methods.
Feb 19, 2026

CounterFlowNet: From Minimal Changes to Meaningful Counterfactual Explanations

Counterfactual explanations (CFs) provide human-interpretable insights into model's predictions by identifying minimal changes to input features that would alter the model's output. However, existing methods struggle to generate multiple high-quality explanations that (1) affect only a small portion of the features, (2) can be applied to tabular data with heterogeneous features, and (3) are consistent with the user-defined constraints. We propose CounterFlowNet, a generative approach that formulates CF generation as sequential feature modification using conditional Generative Flow Networks (GFlowNet). CounterFlowNet is trained to sample CFs proportionally to a user-specified reward function that can encode key CF desiderata: validity, sparsity, proximity and plausibility, encouraging high-quality explanations. The sequential formulation yields highly sparse edits, while a unified action space seamlessly supports continuous and categorical features. Moreover, actionability constraints, such as immutability and monotonicity of features, can be enforced at inference time via action masking, without retraining. Experiments on eight datasets under two evaluation protocols demonstrate that CounterFlowNet achieves superior trade-offs between validity, sparsity, plausibility, and diversity with full satisfaction of the given constraints.