RADS: Reinforcement Learning-Based Sample Selection Improves Transfer Learning in Low-resource and Imbalanced Clinical Settings
Authors: Wei Han, David Martinez, Anna Khanina, Lawrence Cavedon, Karin Verspoor
Organizations: School of Computing Technologies, RMIT University · Department of Infectious Disease, Peter MacCallum Cancer Centre · 3National Centre for Infections in Cancer, Melbourne · 5Sir Peter MacCallum Department of Oncology, The University of Melbourne · School of Computing and Information Systems, The University of Melbourne
Abstract
A common strategy in transfer learning is few shot fine-tuning, but its success is highly dependent on the quality of samples selected as training examples. Active learning methods such as uncertainty sampling and diversity sampling can select useful samples. However, under extremely low-resource and class-imbalanced conditions, they often favor outliers rather than truly informative samples, resulting in degraded performance. In this paper, we introduce RADS (Reinforcement Adaptive Domain Sampling), a robust sample selection strategy using reinforcement learning (RL) to identify the most informative samples. Experimental evaluations on several real world clinical datasets show our sample selection strategy enhances model transferability while maintaining robust performance under extreme class imbalance compared to traditional methods.
Few-shot learning enables medical image segmentation models to adapt to new tasks using only a small number of labelled examples. However, adaptation performance depends strongly on which examples are selected for the support set. Effective support sets should capture relevant variation within the target domain and be informative for adaptation, with constituent samples providing complementary information. Despite this, existing active data selection approaches largely prioritise samples individually and do not explicitly account for interactions between examples. In this work, we propose a reinforcement learning framework for support-set selection in few-shot medical image segmentation, enabling support sets to be optimised jointly rather than through independent sample scoring. Given a pool of unlabelled candidate images, an agent directly predicts a support set that maximises downstream segmentation performance. Experiments on a cross-institutional pelvic MRI dataset demonstrate improvements over random selection and current state-of-the-art methods. Our findings highlight the importance of support-set complementarity for effective adaptation and demonstrate the potential of reinforcement learning for optimising adaptation sets.
Real-world datasets across image and text domains are often characterized by skewed class distributions and noisy annotations, which jointly degrade model performance, particularly on minority classes. Among existing solutions, active learning offers an effective and efficient paradigm by selectively querying the most informative and balanced samples for annotation. We propose an innovative active learning framework that mitigates class imbalance and selects the most informative samples to annotate. Leveraging foundation model priors, our algorithm enables imbalance-aware co-decisions between foundation model and small model to tackle noisy and imbalanced labels across various domains. We introduce the first study to systematically explore active learning under the dual challenges of label noise and class imbalance across image and text domains. Extensive experiments on imbalanced datasets demonstrate that our method achieves substantial annotation savings-over 50% compared to the best active learning baseline-while preserving performance and robustness to label noise.
Cold-Start Active Learning (CSAL) aims to select a valuable subset from an unlabeled pool without any prior knowledge or human assistance. Existing methods take diverse routes based on typicality, coverage, or diversity. Each rests on its own inductive bias and therefore performs well on some tasks yet poorly on others. We argue that the real challenge is not to design yet another selection heuristic, but to make CSAL adapt automatically to the data and task at hand. To this end, we revisit CSAL through the lens of optimal transport. First, we propose a generalized transport selection framework that reveals the shared allocation structure of existing methods and exactly subsumes representative formulations. Second, we introduce a theoretical analysis that characterizes the trade-off controlled by entropic regularization and establishes a task-agnostic minimax bound for cold-start selection. These results provide a principled foundation for adapting the regularization strength to the unlabeled data. Third, we derive a data-adaptive regularization rule and present a novel Sinkhorn-based CSAL algorithm, termed ε-Adaptive Selection (ε-AS). Extensive experiments on six public datasets and multiple annotation budgets show that ε-AS consistently achieves state-of-the-art performance. On ImageNet-1k, it improves the average accuracy over ActiveFT by 1.29% while reducing selection time by 56.2%. Code will be released at https://github.com/Z-yiwei/OT-CSAL