Early Detection of Water Stress by Plant Electrophysiology: Machine Learning for Irrigation Management
Authors: Eduard Buss, Till Aust, Heiko Hamann
Organizations: Department of Computer and Information Science, University of Konstanz, Universitätsstraße 10, Konstanz, 78464, Baden-Württemberg, Germany.
Purpose: Fast detection of plant stress is key to plant phenotyping, precision agriculture, and automated crop management. In particular, efficient irrigation management requires early identification of water stress to optimize resource use while maintaining crop performance. Direct physiological sensing offers the potential to detect stress responses before visible symptoms appear. Methods: In this study, we recorded electrophysiological signals from greenhouse-grown tomato plants subjected to water stress and developed a framework based on machine learning for online stress detection. The recorded time-series data were processed using a processing pipeline that includes statistical feature extraction and selection, automated machine learning or alternatively deep learning, and probability calibration. Results: Across multiple input time horizons, we found that a 30-minute look-back window strikes the best balance between rapid decision-making and classification performance. Using automated machine learning, the framework achieved classification accuracies of up to 92%, outperforming deep learning approaches. Sequential backward selection reduced the feature set while maintaining performance. Importantly, the framework detects transitions from healthy to stressed states in recordings that were not included in the training set. Conclusion: Overall, we provide a decision-support tool for farmers and establish a foundation for biofeedback-driven irrigation control to improve resource efficiency in (semi-)autonomous crop production systems.
Plant diseases, resulting from both biotic and abiotic stresses, cause an estimated 20-40% loss in global agricultural yield annually, resulting in economic damages exceeding USD 220 billion. Accurate and scalable stress quantification is essential for precision agriculture, yet traditional manual assessments are labour-intensive and subjective. This paper proposes a unified deep learning pipeline integrating semantic segmentation, regression-based severity estimation, and disease classification. Stress severity is categorised into four levels (Low to Very High) based on the proportion of infected leaf area. Experiments on the Apple Tree Leaf Disease Segmentation dataset (1,641 samples, six classes) evaluate four models: U-Net (MobileNetV2), SegFormer, FCN, and PSPNet. U-Net with MobileNetV2 achieves the best performance with 98.20% pixel accuracy, 0.70 mIoU, and 99.41% detection accuracy at 14.7 ms per image, making it suitable for real-time use. SegFormer performs competitively (mIoU 0.66), while FCN and PSPNet show lower spatial accuracy (approximately 0.49 mIoU). The computed severity index strongly correlates with expert annotations (r = 0.968, R^2 = 0.937), demonstrating the system's reliability for automated crop monitoring and decision support.
Early and accurate detection of crop stress is essential to improve agricultural productivity and ensure global food security. However, collecting a large labeled crop stress dataset is a challenging task. To address this challenge, we introduce a novel spatial-temporal stress network (STS-NET), built on a self-supervised 3D-convolutional autoencoder (3D-CAE), designed to utilize Satellite Image Time Series (SITS) data for crop stress detection. STS-NET exploits four vegetation indices: Normalized Difference Vegetation Index (NDVI), Normalized Difference Vegetation Index (GNDVI), Red-Edge Chlorophyll Index (RECI) and Normalized Difference Red-Edge Index (NDRE) obtained from high resolution Planetscope imagery to capture spatiotemporal stress patterns. The model is trained on our BSPT (Barnala Spatial-Temporal) dataset and evaluated on a real-world sugarcane dataset collected over a year from a 2.5-acre test plot located in Lakhimpur-Kheri (LK) district in Uttar Pradesh in India. STS-NET achieved a precision of 97. 98% for water stress, 85.08% for nitrogen stress, and 83.47% for combined stress. The results demonstrate the potential of STS-NET in effectively detecting stress in sugarcane crops with minimal reliance on labeled data. Furthermore, STS-NET can serve as a robust feature extractor for simpler models.
Plant disease detection is still largely manual in Bangladesh, where extension workers eyeball leaf samples across millions of smallholdings. We built AgriMind to automate this: an ensemble of ResNet50, EfficientNet-B0, and DenseNet121 trained on 20,638 PlantVillage images across 15 pepper, potato, and tomato disease classes. Transfer learning with frozen ImageNet backbones and 10 epochs of head-only training keeps the pipeline lightweight. Individual models hit 96--97% on the held-out test set, but averaging their softmax outputs pushes the ensemble to 99.23% -- a two-thirds cut in error rate. We tried biasing the average toward the best validation model; it backfired. Dropping any single model also hurt. Pepper and potato classify perfectly; tomato, with ten visually similar classes, still reaches 99.01%. On an NVIDIA T4 GPU the full ensemble runs at 53 FPS. Whether that translates to real-time mobile use depends on TensorFlow Lite optimization -- work we have not yet completed.