Preliminary Insights in Chronos Frequency Data Understanding and Reconstruction

EEG foundation models, pre-trained on large-scale unlabelled EEG data, have emerged as a promising direction towards learning generalizable EEG representations. Despite showing positive results in data-rich regimes, they often fail to outperform significantly smaller supervised models in low-resource settings compared to fully supervised models. We provide a mechanistic account of this shortcoming, attributing it to a fundamental mismatch between reconstruction-based pretext tasks and the idiosyncratic spectral structure of EEG signals, which decompose into distinct high-power aperiodic and low-power oscillatory components. Using controlled, synthetically-generated EEG inputs, we demonstrate that EEG foundation model embeddings are biased to capture the aperiodic components of the EEG signal while under-representing oscillatory components, particularly at higher frequencies. Additionally, linear probe evaluations on real-world BCI datasets further reveal that embeddings encode subject identity more strongly than task-relevant information, thereby reinforcing the low-frequency and aperiodic component bias in foundation model embeddings trained primarily on reconstruction based objectives. Together, these findings elucidate a failure mode in reconstruction based EEG foundation models and motivate future work to incorporate auxiliary losses explicitly targeting high-frequency oscillatory structure as a path toward more capable and generalizable EEG representations.

Time series foundation models rely on large-scale pretraining over diverse datasets across domains, yet their heterogeneity in temporal patterns could hinder the effectiveness of training and learning transferable time series representations. Inspired a fundamental concept, normalized power spectral density (PSD) in signal processing, we assume harmonizing datasets via PSDs in the spectral domain could reduce mismatches and enhance pretraining. We then go beyond the direct intractable minimization optimization and innovatively reformulate it as a principled harmonization approach. Specifically, we propose Harmonizer, a module that reshapes spectral structures and implicitly harmonizing PSDs across datasets, which theoretically corresponds to a shared reparameterization of second-order temporal correlations. Our theoretical analysis further reveals token interactions with Harmonizer can be efficiently mediated by a compact set of resonators, motivating a HarmonicAttention design that performs self-attention in a low-dimensional interaction space. Then, we propose Olivia, a novel time series foundation model built upon these harmonization mechanisms. Extensive experiments on two large-scale benchmarks (TSLib and GIFT-Eval) and extra 6 datasets from GluonTS, demonstrate Olivia consistently achieves state-of-the-art performance under zero-shot, few-shot, and full-shot forecasting scenarios. Our code is available at https://github.com/TSTS13/Olivia.

End-to-end neural audio models achieve high-fidelity compression and generation. We might read that performance as evidence they directly represent interpretable features such as pitch and timbre, but a model can produce plausible outputs without doing so. A model may encode these features in any reachable basis, but regardless of which, the features are well described as compositions of time-frequency-localized primitives. Whether state-of-the-art encoders preserve access to these primitives, and thus to compositions of them, remains unclear. Through theoretical analysis and controlled experiments, we show that several state-of-the-art strided convolutional encoders impose two structural bottlenecks, both predictable from architecture and signal structure, on access to these primitives: (1) they collapse primitives into alias equivalence classes, establishing a bound on representational capacity, and (2) they limit the frequency resolution available to learned filters, restricting separability. For well structured data, we find collapse rates of 31-35% and filter bandwidths 10-35x above the theoretical resolution bound, confirming that both bottlenecks arise under realistic signal conditions. We then introduce Gabor Latent Refactorization (GLRF), a lightweight post-hoc intervention that re-expresses encoder latents in a frequency-localized basis, reducing filter bandwidths from 10-35x to 1.5-3x of the theoretical resolution bound while preserving reconstruction fidelity and improving control over attributes like pitch. These results show that the encoders in question predictably degrade access to frequency-localized primitives, entangling the features that depend on them, and that a lightweight, retraining-free intervention can recover much of that access, improving steerability and interpretability.