No Free Swap: Protocol-Dependent Layer Redundancy in Transformers

One-shot pruning methods like Wanda and SparseGPT apply the same sparsity ratio to every layer of a transformer, ignoring known variation in layer importance. We propose PALS (Percentile-Aware Layerwise Sparsity), which adjusts per-layer sparsity based on the 99th percentile of activation magnitudes, bounded to $\pm 5\%$ around the target ratio. On LLaMA-2-7B at 50% sparsity, PALS achieves 10.96 WikiText-2 perplexity versus 12.92 for uniform Wanda (mean over 9 runs, $p < 0.001$). The benefit is architecture-dependent: LLaMA-3-8B shows marginal gains and Mistral-7B shows none. We also find that gradient-based allocation -- the seemingly more principled approach -- produces results worse than random, suggesting that gradient magnitude does not predict the impact of discrete weight removal. PALS adds negligible cost to the pruning pipeline and requires no fine-tuning.

Layer pruning removes entire Transformer decoder blocks from large language models, but introduces a mismatch between the hidden state received by the next surviving layer and the distribution it was trained to process, leading to significant performance degradation. We propose Ghosted Layers, a training-free recovery module that addresses this issue by solving a boundary activation alignment problem. Our method derives a closed-form optimal linear operator from a small calibration set to reconstruct the activation discrepancy introduced by the pruned layers. We show that this solution corresponds to the unconstrained optimum of the alignment objective, whereas existing methods are restricted to constrained solutions over limited operator subspaces. Experiments across multiple LLM backbones and pruning strategies demonstrate that our method consistently improves accuracy and perplexity over prior training-free baselines, while preserving the efficiency gains of layer pruning. Official code repository: https://github.com/daniel-eai/ghosted_layers_official_repository/.

Transformer architectures exhibit cross-layer redundancies, yet post-training compression pipelines typically optimize layers in isolation or rely on heuristic grouping strategies that disregard layer-specific activation geometries. We introduce a principled, training-free framework that sequentially optimizes cross-layer weight pairings and shared-dictionary factorizations. Rather than forcing weights of adjacent layers to share a basis or heuristically merging activation statistics, our approach identifies structurally compatible projections and learns a shared representation that better preserves each layer's distinct calibration geometry. Coupled with structured sparsity, this yields highly efficient weight decompositions without sacrificing functional fidelity. Across diverse architectures, scales, and modalities, our method achieves state-of-the-art results, consistently outperforming independent structured weight decompositions and alternative pairwise weight factorizations, which operate under heuristic grouping strategies. By replacing heuristic engineering strategies with a convergent, optimization-driven pipeline, we establish a theoretically grounded foundation for scalable, transformer compression across different modalities.