CoilDrop-MRI: Self-supervised physics-guided MRI reconstruction with coil dropout
Authors: Tongxi Song, Ziyu Li, Zihan Li, Wen Zhong, Congyu Liao, Yang Yang, Hua Guo, Wenchuan Wu, +1 more
Organizations: School of Biomedical Engineering, Tsinghua Medicine, Tsinghua University, Beijing, China · Oxford Centre for Integrative Neuroimaging, FMRIB, Nuffield Department of Clinical Neurosciences, University of Oxford, Oxford, UK · Department of Radiology & Biomedical Imaging, University of California San Francisco, San Francisco, CA, United States · Center for Biomedical Imaging Research, Tsinghua University, 30 Shuangqing Road, Haidian District, Beijing, China, 100084
Abstract
Self-supervised deep learning-based methods have shown great promise for accelerated magnetic resonance imaging (MRI) reconstruction, achieving high image quality without requiring fully sampled data for training. These methods typically partition the acquired data into two disjoint subsets to construct input-target pairs for optimizing the reconstruction network. However, existing approaches perform this partition exclusively within the spatial frequency (k-space) domain, leaving the coil dimension unexplored. To enforce full exploitation of signal correlation across receiver coils, we propose CoilDrop-MRI, which applies coil-wise dropout to the input and uses the dropped data as training targets in a self-supervised framework. This method is integrated into unrolled architectures in both image-domain (SENSE) and k-space (SPIRiT) formulations. We further demonstrate its versatility by extending CoilDrop-MRI to multi-shot, phase-corrected diffusion MRI (dMRI) reconstruction. CoilDrop-MRI is extensively validated on multi-site, multi-field-strength (0.3T, 0.55T, and 3T), and multi-modality (T1-weighted, T2-weighted, T2-FLAIR, and dMRI) datasets and consistently outperforms state-of-the-art self-supervised methods, achieving quality comparable to supervised reconstruction methods without requiring fully sampled reference training data. Moreover, CoilDrop-MRI exhibits strong data efficiency and robust generalization across imaging conditions, establishing it as a practical and versatile framework for self-supervised parallel MRI reconstruction.
Zero-Shot Self-Supervised Learning (ZS-SSL) has emerged as a promising paradigm for accelerated Magnetic Resonance Imaging (MRI) reconstruction, eliminating the reliance on fully-sampled external datasets. However, learning solely from a single under-sampled scan suffers from supervision scarcity and optimization instability, often leading to overfitting or artifacts. To address these challenges, we propose a robust physics-driven ZS-SSL framework that synergizes physical consistency with image-domain non-local priors. Our method introduces three core innovations: (1) a Coil Sensitivity Map (CSM)-Guided Dynamic Repository, which stabilizes the training trajectory by filtering physically inconsistent artifacts based on coil sensitivity constraints; (2) a SPIRiT-based regularization, which enforces k-space self-consistency via a learned correlation kernel and stochastic masking; (3) a Non-Local Self-Similarity (NSS) Pixel Bank, which leverages the high-fidelity reference established by the former modules to explicitly mine non-local anatomical similarities, thereby augmenting supervision in the image domain. Extensive experiments on the FastMRI dataset demonstrate that our approach achieves state-of-the-art performance, particularly under high acceleration factors, effectively bridging the gap between zero-shot learning and supervised methods. The code is available at https://github.com/Zolento/NS-SSL.
Accelerated magnetic resonance imaging reduces acquisition time, but reconstruction from undersampled k-space can blur diagnostically relevant structures or introduce failures that are not captured by global image metrics. We propose SA-RDM-DC, a Self-Auditing Residual generative Drifting Model with Data Consistency for accelerated knee MRI. The method adapts the newly proposed generative drifting paradigm to accelerated MRI by training a physics-conditioned drift field from the zero-filled reconstruction toward the fully sampled residual correction. It predicts image- and missing-k-space residual corrections, enforces data consistency with acquired k-space, uses frequency-aware and residual drifting supervision to recover fine detail, and produces dense error maps and slice-level risk scores in the same inference pass. We evaluate SA-RDM-DC on multi-coil fastMRI knee data at acceleration factors of 4, 8, and 12, with fastMRI+ pathology annotations for region-level and classifier-based task preservation, and on SKM-TEA for zero-shot and fine-tuned protocol-shift evaluation. Compared with zero-filled reconstruction, UNet-image-SENSE, DC-UNet, Score-Diffusion, ELF-Diff, SENSE-VarNet, and MoDL baselines, SA-RDM-DC achieves the highest SSIM across fastMRI acceleration factors while retaining subsecond per-slice inference and avoiding the long sampling time of iterative diffusion baselines. In pathology-aware analysis, SA-RDM-DC preserves lesion-region structural fidelity and reduces meniscus prediction instability. Its self-auditing scores strongly identify high-error reconstructions on fastMRI and partially transfer as a selective-review signal under SKM-TEA protocol shift. These results support reconstruction evaluation that jointly considers image fidelity, pathology preservation, runtime, and case-specific reliability.
Cardiac cine Magnetic Resonance Imaging (MRI) is a critical diagnostic tool that provides dynamic insights for radiologists. To accelerate acquisition, under-sampled k-space data is often used, requiring reconstruction methods that combine coil sensitivity encoding with prior information to recover missing data. Deep learning approaches have gained more attention for leveraging data-adaptive priors. While supervised learning approaches are a common choice, they depend on fully sampled reference data, which is not always available. Unsupervised methods eliminate the need for fully sampled reference data, which can be advantageous in cardiac cine MRI reconstruction. Among them, implicit neural representations (INRs) have shown great potential due to their simple architecture and good quality reconstructions. In this work, we propose an image-domain dual-branch INR framework, termed I-FP-INR, which extends the original INR design by introducing an additional feature-processing branch. This design aims to extract complementary feature embeddings to enhance the overall representation, thereby benefiting reconstruction. Extensive evaluations on both public datasets and in-house data show consistent improvements over baseline methods in reconstruction quality, with strong robustness across varied scenarios.