ChronoQG: Towards a Temporally Expressive and Hop-Bounded Benchmark for Temporal Knowledge Graph Question Generation

Retrieval-Augmented Generation (RAG) has shown strong effectiveness in grounding Large Language Models (LLMs) with external knowledge. However, existing RAG and Graph RAG frameworks largely treat knowledge as static or associate time with coarse-grained timestamps or metadata, failing to capture rich temporal structures such as duration, overlap, and containment. We propose IA-RAG, a hierarchical temporal RAG framework that models knowledge as time intervals and performs retrieval under formal temporal constraints. IA-RAG represents facts as Interval Event Units (IEUs) and organizes them into a hierarchical Thematic Forest, where temporal dependencies are governed by Allen's Interval Algebra. To handle incomplete or uncertain temporal boundaries, IA-RAG further introduces a Sub-graph Time Tightening mechanism that refines fuzzy intervals through logical constraints within connected event subgraphs. In addition, IA-RAG supports implicit temporal semantic retrieval through interval-algebra-guided traversal. Experiments on multiple temporal question answering benchmarks, including TimeQA, TempReason, and ComplexTR, demonstrate that IA-RAG achieves strong temporal retrieval and reasoning performance, particularly on complex compositional temporal reasoning tasks. Our code is released at https://github.com/xiaoAugenstern/LogicalRAG_TemporalQA.

Biomedical knowledge graphs (KGs) treat disease associations as static facts, but temporal information is crucial for clinical reasoning, e.g., a symptom diagnostic of one disease at age 3 may imply a different disease at age 13. Existing KGs such as PrimeKG, Hetionet, and iKraph do not encode when a finding becomes clinically relevant over the course of a disease. This limits their usefulness for longitudinal clinical reasoning and retrieval augmentation. We introduce ChronoMedKG, a temporal biomedical knowledge graph that contains 460,497 evidence-linked triples (filtered from 13M raw extractions) covering 13,431 diseases. Each association is tied to temporal components like onset window or progression stage, which are backed by PMID-traceable evidence and a multi-signal credibility score. The graph is constructed through a disease-autonomous multi-agent pipeline in which multiple frontier LLMs independently extract knowledge from PubMed and PMC literature. Only those relations are kept that are supported by multi-model consensus, survive credibility filtering, as well as ontology alignment. ChronoMedKG scored 92.7% agreement against Orphadata and adds temporal grounding for 6,250 diseases absent from HPOA, Orphadata, and Phenopackets, including 1,657 Orphanet-coded rare diseases. We further introduce ChronoTQA, a benchmark of 3,341 questions across eight task types (six temporal plus two static controls), with a 12-question supplementary probe. Frontier LLMs lose roughly 30 points moving from static to temporal questions; ChronoMedKG retrieval rescues 47-65% of their long-tail failures, against 17-29% for HPOA-RAG. As such, ChronoMedKG provides a crucial temporal axis for retrieval-augmented clinical systems that was previously absent.

Temporal knowledge graphs (TKGs) represent evolving relational systems, whose underlying data-generating processes often change over time. Yet, TKG forecasting models are commonly evaluated only on empirical benchmark datasets that provide limited insight into the models' robustness to such distribution shifts. Recognising this issue, we study TKG forecasting under controlled shift environments using a synthetic TKG generator that encodes three temporal and structural properties -- recurrence, homophily, and periodicity -- as data-generating mechanisms. This allows us to evaluate seven forecasting architectures under stationary and shifting regimes. Our experiments suggest that robustness in TKG forecasting is highly signal-dependent. Recurrence-based and periodic regularities are largely recoverable under stationary conditions, and simple memory-based baselines can be competitive when recurrence dominates the data. However, structural breaks reveal limitations in model adaptivity, with shifts in latent entity-community structure posing the strongest challenge in our study. Overall, our findings improve the understanding of the capabilities and limitations of current TKG models confronted with temporal distribution shifts.