How Should Reasoning Be Organized in a Transformer's Latent Space?

Current transformers discard their rich latent residual stream between positions, reconstructing latent reasoning context at each new position and leaving potential reasoning capacity untapped. The State Stream Transformer (SST) V2 enables parameter-efficient reasoning in continuous latent space through an FFN-driven nonlinear recurrence at each decoder layer, where latent states are streamed horizontally across the full sequence via a learned blend. This same mechanism supports continuous latent deliberation per position at inference time, dedicating additional FLOPs to exploring abstract reasoning before committing to a token. A two-pass parallel training procedure resolves the sequential dependency of the recurrence to allow compute-efficient training. Hidden state analysis shows the state stream facilitates reasoning through exploration of distinct semantic basins in continuous latent space, where transitions at content-dependent positions move the model into a substantially different Bayesian posterior, directly influencing the latent space at future positions. We also find, via a learned probe, that at the first generated token position, the latent state already predicts whether the eventual answer will survive or break under additional latent computation for every subsequent position. Co-trained into an existing 27B backbone using only a small dataset of GSM8K examples, the SST delivers a +15.15 point gain over a fine-tuning-matched baseline on out-of-distribution GPQA-Diamond and cuts that same baseline's remaining GSM8K errors by 46%, together showing that the reasoning improvement is attributable to the architectural mechanism rather than scale or training data. On GPQA-Diamond, the resulting 27B SST also achieves higher accuracy than several larger open-weight and proprietary systems, including open-weight models up to 25 times larger.

Reasoning in large language models is often discussed as a single capability, but some of its gains may stem from simpler underlying operations. We examine two such primitives, recall and state-tracking, through five controlled task families centered on state-based recall, and compare matched transformer and hybrid architectures with and without reasoning augmentation. Across the suite, reasoning-augmented variants substantially outperform instruction-only variants, often by large margins. This pattern is consistent with the State over Tokens view: externalized reasoning traces help because they carry the intermediate state forward in token space. By contrast, hybrid inductive bias does not yield a uniform advantage in accuracy once reasoning tokens are available. When architectural differences do appear, they follow task structure: the hybrid Think model is more robust on strictly sequential chained updates, whereas the transformer Think model is more robust on flat multi-hop retrieval. We therefore cast the main contribution of this study as a descriptive account of what drives performance on state-based recall tasks: reasoning-token augmentation appears to be the dominant factor, while hybrid advantages are narrower, task-dependent, and potentially more about inference efficiency than overall capability. We also release the codebase and data required to reproduce these results.

Large Language Models (LLMs) increasingly rely on intermediate reasoning, yet explicit Chain-of-Thought (CoT) suffers from a linguistic space bottleneck: each thought must be decoded into tokens, causing high inference overhead. Latent reasoning moves deliberation into continuous space, but existing methods mostly learn deterministic or reward-maximizing paths, lacking a principled way to allocate probability across trajectories with different correctness and costs. We propose Latent Thought Flow (LTF), which models reasoning as variable-length continuous trajectories and trains a sampler to match a reward-induced posterior over answer quality and computation cost. We instantiate this with a continuous GFlowNet using stochastic latent transitions. To handle sparse answer supervision, we introduce an Entropy-Weighted Subtrajectory Balance objective for intermediate rewards and a reference-prior regularizer to anchor exploration. Experiments under finetuning and transfer learning settings show that LTF outperforms explicit CoT and latent reasoning baselines, improving accuracy by 9.5% while reducing reasoning length by 27.2% on average compared with strong latent reasoning baselines.