Deep Learning of Topological Equivalence Classes

We study the grokking phenomenon through the lens of topology. Using persistent homology on point clouds derived from the embedding matrices of a range of models trained on modular arithmetic with varying primes, we identify a clear and consistent topological signature of grokking: a sharp increase in both the maximum and total persistence of first homology ($H_1$). Persistence diagrams reveal the emergence of a dominant long-lived topological feature together with increasingly structured secondary features, reflecting the underlying cyclic structure of the task. Compared to existing spectral and geometric diagnostics -- specifically, Fourier analysis and local intrinsic dimension -- persistent homology provides a unified geometric and topological characterization of representation learning, capturing both local and global multi-scale structure. Ablations across data regimes and control settings show that these topological transitions are tied to generalization rather than memorization. Our results suggest that persistent homology offers a principled and interpretable framework for analyzing how neural networks internalize latent structure during training.

The universal approximation theorem establishes that neural networks can approximate any continuous function on a compact set. Later works in approximation theory provide quantitative approximation rates for ReLU networks on the class of $α$-Hölder functions $f: [0,1]^N \to \mathbb{R}$. The goal of this paper is to provide similar quantitative approximation results in the context of group equivariant learning, where the learned $α$-Hölder function is known to obey certain group symmetries. While there has been much interest in the literature in understanding the universal approximation properties of equivariant models, very few quantitative approximation results are known for equivariant models. In this paper, we bridge this gap by deriving quantitative approximation rates for several prominent group-equivariant and invariant architectures. The architectures that we consider include: the permutation-invariant Deep Sets architecture; the permutation-equivariant Sumformer and Transformer architectures; joint invariance to permutations and rigid motions using invariant networks based on frame averaging; and general bi-Lipschitz invariant models. Overall, we show that equally-sized ReLU MLPs and equivariant architectures are equally expressive over equivariant functions. Thus, hard-coding equivariance does not result in a loss of expressivity or approximation power in these models.

Despite an ever-increasing interest in topological deep learning models that target higher-order datasets, there is no consensus on how to evaluate such models. This is exacerbated by the fact that topological objects permit operations, such as structural refinements, that are not appropriate for graph data. In this work, we extend MANTRA, a benchmark dataset containing manifold triangulations, to a larger class of manifolds with more diverse homeomorphism types. We show that, unlike prior claims, both graph neural networks (GNNs) and higher-order message passing (HOMP) methods can saturate the benchmark. However, we find that this is contingent on the right representation and feature assignment, emphasizing their importance in baseline models. We thus provide a novel evaluation protocol based on representational diversity and triangulation refinement. Surprisingly, we find no indication that existing models are capable of generalizing beyond the combinatorial structure of the data. This points towards a research gap in developing models that understand topological structure independent of scale. Our work thus provides the necessary scaffolding to evaluate future models and enable the development of topology-aware inductive biases.