OpenStripe supports open-set identification and spatial stripe profiling in wild Amur tigers
Authors: Yichun Peng, Yansong Li, Jin Hou, Qi Song, Xi Guo, Ning Zhang, Degang Wei, Huang Yang, Yu Guan, Jianping Ge, Lei Bao, Tianming Wang
Organizations: School of Statistics, Beijing Normal University, Beijing, China · Ministry of Education Key Laboratory for Biodiversity Science and Ecology Engineering, College of Life Sciences, Beijing Normal University, Beijing, China · National Forestry and Grassland Administration Key Laboratory for Conservation Ecology of Northeast Tiger and Leopard, Beijing, China · School of Artificial Intelligence, Beijing Normal University, Beijing, China · Key Laboratory of Environmental Change and Natural Disaster of Chinese Ministry of Education, Faculty of Geographical Science, Beijing Normal University, Beijing, China
Non-invasive camera-trap monitoring of endangered wildlife requires open-set individual identification---grouping field images into identities without predefined classes or a known population size---yet pose deformation and cluttered backgrounds complicate image comparison. Here, we present OpenStripe, a multi-agent framework that reconstructs canonical two-dimensional (2D) tiger torso patterns and encodes four interpretable local stripe structures: breakpoints, bifurcations, irregular structures, and round structures. We evaluated OpenStripe on 100 camera-trap records from 28 wild Amur tigers (Panthera tigris altaica), representing nearly one-third of the documented population in the Northeast China Tiger and Leopard National Park. Combining all four complementary structures enabled automatic identity grouping with 0.90 matched accuracy and a 0.85 adjusted Rand index (ARI), outperforming 49 baseline configurations under the same backend (up to 0.43 accuracy and 0.14 ARI). In addition, results from OpenStripe indicate that stripe similarity in Amur tigers declines with geographic distance and suggest that traits such as fractal dimension and inter-stripe spacing are associated with geographic proximity. OpenStripe thus provides an interpretable representation that connects automated individual grouping with spatial phenotypic profiling in wild populations.
AnimalCLEF26 addresses discovery-oriented animal re-identification, where systems must both attach query images to known individuals and discover unseen individuals by clustering them correctly. We present a similarity-to-clustering pipeline for this setting across Eurasian lynx, fire salamander, loggerhead sea turtle, and Texas horned lizard images. The method first isolates the target specimen using segmentation and then applies lightweight species-specific preprocessing for lynx, sea turtle, and salamander images to enhance identity-relevant visual cues, while Texas horned lizard images are used after segmentation only. Pairwise similarities are then estimated with WildFusion by calibrating and combining a MiewID global descriptor with two local matching branches, ALIKED + LightGlue and DISK + LightGlue. The resulting query-query similarities are refined and converted into identity clusters using graph-based clustering, while query-database similarities are used to attach confident samples to known identities. We evaluate training-free and fine-tuned MiewID variants, including Dynamic ArcFace and SphereFace2-Focal adaptations, and combine them in the final ensemble. Our selected ensemble substantially improves on the WildFusion baseline, achieving the best public ARI of 0.72124 and a private ARI of 0.70393, while a simpler preprocessing-before-calibration variant achieves the best private ARI of 0.71087. These results indicate that calibrated global-local fusion with species-aware preprocessing choices is effective for open-set wildlife re-identification under challenging field conditions and visual variation. The implementation code is available on GitHub.
Made In Alexandria Artificial Intelligence Team, Alexandria, Egypt · Faculty of Computers and Data Science, Alexandria University, Alexandria, Egypt · Faculty of Computer Science and Engineering, Alamein International University, New Alamein City, 51718, Egypt +3
Animal re-identification (ReID) in camera-trap surveys remains challenging due to low image quality, strong variation in illumination and viewpoint, and highly imbalanced numbers of observations per individual. As a result, current ReID performance is often insufficient for fully automated use, and practical workflows typically depend on expert review of algorithmically proposed candidate matches. Moreover, most existing approaches focus almost exclusively on visual cues and overlook auxiliary information routinely available in field studies, such as image timestamps and camera-trap locations. We introduce Spotted, a location-informed, human-in-the-loop animal ReID framework that integrates visual similarity with spatio-temporal feasibility priors derived from camera locations, thereby reducing the amount of required expert review. Our method (i) computes an image-model-agnostic feasibility score based on the minimum travel speed required for two detections to correspond to the same individual, (ii) uses these feasibility cues as pseudo-supervision to train a lightweight head on top of a frozen visual foundation model, and (iii) fuses adapted visual similarity with spatio-temporal feasibility to obtain a robust pairwise matching score. We additionally integrate an active pair sampling strategy to accelerate annotation by initially prioritizing uncertain predictions. We evaluate Spotted on three challenging camera-trap ReID datasets comprised of spotted hyenas and leopards, which we release as part of this work. Our model improves average top-5 identification accuracy by 9pp, 2pp and 9pp over the best baseline on our LeopardID102, SpottedHyenaID109 and SpottedHyenaID415 datasets, respectively. Further, we show that our human-in-the-loop strategy reduces the number of queried comparisons by up to 69pp while achieving equivalent positive matches.
Halil Sina Kelebek, Julia Hindel, Kobus Hoffman +9
Oxford Robotics Institute, University of Oxford, Oxford, UK · Department of Computer Science, University of Freiburg, Germany · Bubye Valley Conservancy, Zimbabwe +3
As with most ``in the wild'' collections of the natural world, the North America Camera Trap Images (NACTI) dataset exhibits long-tailed class imbalance, with the largest class covering over 50% of its 3.7M images. Building on the PyTorch Wildlife model, we systematically evaluate Long-Tail Recognition (LTR) methodologies to benchmark species recognition performance, including specialised loss functions and LTR-sensitive regularisation. Our optimised configuration achieves state-of-the-art 99.40% Top-1 accuracy on the NACTI test split, significantly outperforming standard baselines and previously reported top performances. To assess robustness under domain shifts (e.g., night-time captures, occlusion, motion-blur), we extend our evaluation across three independent reduced-bias test sets (including ENA-Detection, Caltech Camera Traps and Missouri Camera Traps). Across these out-of-distribution (OOD) evaluations, our LTR-enhanced model consistently demonstrates substantially stronger generalisation capabilities compared to standard cross-entropy approaches. However, qualitative and quantitative analyses underline that current LTR optimisations cannot fully overcome representational bottlenecks, resulting in catastrophic predictive breakdown for rare `Tail' classes under severe domain shift. For maximum reproducibility, all dataset splits, key code, and network weights are published with this paper at https://github.com/ZehuaLiuY/Species-Classification.
Zehua Liu, Tilo Burghardt
School of Computer Science, University of Bristol, MVB Woodland Rd, BS8 1UB, Bristol, UK