Biomedical KGs

KG: Knowledge Graph

Ask about this topic

Momentum

6 papers in the last four weeks, against 1 the four weeks before. 0.1% of all new papers.

Jul 13Week of Sep 28
View on map

Latest papers 41

All topics
CardsList

  1. LLM-Guided Monte Carlo Tree Search over Knowledge Graphs: Composing Mechanistic Explanations for Drug-Disease Pairs

    May 10, 2026Rishabh Jakhar, Michel Dumontier, Remzi CelebiLLM Reasoning with GraphsScientific Discovery

    Institute of Data Science, Department of Advanced Computing Sciences, Maastricht University, The Netherlands

  2. EpiGraph: Building Generalists for Evidence-Intensive Epilepsy Reasoning in the Wild

    May 10, 2026Yuyang Dai, Zheng Chen, Jathurshan Pradeepkumar +4KG ConstructionRetrieval-Augmented Generation

    Florida State University · The University of Osaka · University of Illinois Urbana-Champaign

  3. GATHER: Convergence-Centric Hyper-Entity Retrieval for Zero-Shot Cell-Type Annotation

    May 7, 2026Zhonghui Zhang, Feng Jiang, Shaowei Qin +2Zero-Shot LearningGraph Retrieval-Augmented Generation

    Artificial Intelligence Research Institute, Shenzhen University of Advanced Technology Shenzhen, China · Software College, Northeastern University Shenyang, China

  4. A Unified Benchmark for Evaluating Knowledge Graph Construction Methods and Graph Neural Networks

    May 6, 2026Othmane Kabal, Mounira Harzallah, Fabrice Guillet +2KG ConstructionGraph Neural Networks

    Nantes University, LS2N, Nantes, 44300, France · National Institute of Informatics, Chiyoda-ku, Tokyo, 101-8430, Japan · Institute of Science Tokyo, Tokyo, 152-8550, Japan

  5. Robustness of Graph Self-Supervised Learning to Real-World Noise: A Case Study on Text-Driven Biomedical Graphs

    May 6, 2026Othmane Kabal, Mounira Harzallah, Fabrice Guillet +2Graph SSLText-Attributed Graph Learning

    Nantes University, LS2N, Nantes, 44300, France. · National Institute of Informatics, 2-1-2 Hitotsubashi, Chiyoda-ku,2026 Tokyo 101-8430 Japan. · Institute of Science Tokyo, Tokyo 152-8550 Japan.

  6. Graph Neural Network based Hierarchy-Aware Embeddings of Knowledge Graphs: Applications to Yeast Phenotype Prediction

    May 5, 2026Filip Kronström, Alexander H. Gower, Daniel Brunnsåker +2Graph Neural NetworksRepresentation Learning

    Department of Computer Science and Engineering, Chalmers University of Technology and University of Gothenburg, Sweden · Department of Life Sciences, Chalmers University of Technology, Sweden · Department of Industrial Biotechnology, KTH Royal Institute of Technology, Sweden +1

  7. Unifying biomedical knowledge in a modern multimodal graph

    Apr 29, 2026Lucas Vittor, Ayush Noori, Iñaki Arango +5KG ConstructionMultimodal KGs

    Department of Biomedical Informatics, Harvard Medical School, Boston, MA, USA · Department of Engineering Science, University of Oxford, Oxford, UK · Edison Scientific Inc., San Francisco, CA, USA +4

  8. Quantum Knowledge Graph: Modeling Context-Dependent Triplet Validity

    Apr 27, 2026Yao Wang, Zixu Geng, Jun YanKG ConstructionKnowledge Representation

    HKAI-Sci, City University of Hong Kong · Department of Automation, Tsinghua University · Pratt School of Engineering, Duke University

  9. Large Language Models Meet Biomedical Knowledge Graphs for Mechanistically Grounded Therapeutic Prioritization

    Apr 17, 2026Chih-Hsuan Wei, Chi-Ping Day, Zhizheng Wang +8LLM GroundingLarge Language Model-Guided Scientific Discovery

    Division of Intramural Research (DIR), National Library of Medicine (NLM), National Institutes of Health (NIH); Bethesda, MD 20894, USA · Cancer Data Science Laboratory, Center for Cancer Research, National Cancer Institute (NCI), National Institutes of Health (NIH), Bethesda, MD 20894, USA · Dartmouth Health, Dartmouth Hitchcock Medical Center, Lebanon, NH, USA +2

  10. From Literature to Hypotheses: An AI Co-Scientist System for Biomarker-Guided Drug Combination Hypothesis Generation

    Feb 28, 2026Raneen Younis, Suvinava Basak, Lukas Chavez +1Scientific Hypothesis GenerationOncology

    Peter L. Reichertz Institute for Medical Informatics (PLRI), Hannover Medical School · Lower Saxony Center for Artificial Intelligence and Causal Methods in Medicine (CAIMed) · Sanford Burnham Prebys (SBP) Medical Discovery Institute

  11. BioPIE: A Biomedical Protocol Information Extraction Dataset for Experiment Understanding

    Jan 8, 2026Haofei Hou, Shunyi Zhao, Fanxu Meng +3KG ConstructionDocument Information Extraction

    School of Advanced Manufacturing and Robotics, Peking University · School of Integrated Circuits, Peking University